Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101263177  putative pentatricopeptide repeat-containing protein At4g17915 
 sly-r.6  101263177  putative pentatricopeptide repeat-containing protein At4g17915 
 sly-u.5  101255901  putative pentatricopeptide repeat-containing protein At4g17915 
 ath-u.5  AT5G46680  Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5  100808229  putative pentatricopeptide repeat-containing protein At4g17915 
 vvi-u.5  100257981  putative pentatricopeptide repeat-containing protein At4g17915 
 ppo-u.5  7458478  putative pentatricopeptide repeat-containing protein At4g17915 
 mtr-u.5  11445614  putative pentatricopeptide repeat-containing protein At4g17915 
 osa-u.5  4330986  putative pentatricopeptide repeat-containing protein At4g17915 
 zma-u.5  100384682  Pentatricopeptide repeat-containing protein 

close


Top 50 coexpressed genes to 101263177 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101263177 (sly-u.5 coexpression data)

CoexMap"101263177"


slyLOC101263177 | Entrez gene ID : 101263177
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004232338.1 [sequence] [blastp]
XP_010316320.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_004232338.1)
mito 4,  chlo_mito 4,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_010316320.1)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for XP_004232338.1)
scret 7,  other 3  (predict for XP_010316320.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101263177

.

sly-r.6
for
101263177

.

sly-u.5
for
101255901

.

ath-u.5
for
AT5G46680

.

gma-u.5
for
100808229

.

vvi-u.5
for
100257981

.

ppo-u.5
for
7458478

.

mtr-u.5
for
11445614

.

osa-u.5
for
4330986

.

zma-u.5
for
100384682

.


Ortholog ID: 7368
Species ath gma sly sly osa zma bra bra vvi ppo mtr tae hvu ghi ghi bna sbi sot sot cit bdi nta nta
Symbol AT5G46680 LOC100808229 LOC101263177 LOC101255901 LOC4330986 LOC100384682 LOC103853732 LOC103860954 LOC100257981 LOC7458478 LOC11445614 LOC123086715 LOC123447961 LOC107936369 LOC107918514 LOC106440207 LOC8079715 LOC102605526 LOC102585308 LOC102607642 LOC100839561 LOC107785781 LOC107817333
Function* Pentatricopeptide repeat (PPR-like) superfamily protein putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g46680 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative ABC transporter C family member 15 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 uncharacterized LOC107785781 uncharacterized LOC107817333
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834711 100808229 101263177 101255901 4330986 100384682 103853732 103860954 100257981 7458478 11445614 123086715 123447961 107936369 107918514 106440207 8079715 102605526 102585308 102607642 100839561 107785781 107817333
The preparation time of this page was 0.1 [sec].