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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100839974   ERAD-associated E3 ubiquitin-protein ligase component HRD3 
 osa-u.5   4332310   ERAD-associated E3 ubiquitin-protein ligase component HRD3-like 
 zma-u.5   103639339   ERAD-associated E3 ubiquitin-protein ligase component HRD3 
 zma-u.5   103633963   ERAD-associated E3 ubiquitin-protein ligase component HRD3 
 ath-u.5   EBS5   HCP-like superfamily protein 
 ath-u.5   AT1G73570   HCP-like superfamily protein 
 gma-u.5   732556   SEL-1 
 gma-u.5   100787823   ERAD-associated E3 ubiquitin-protein ligase component HRD3A 
 sly-u.5   101243872   ERAD-associated E3 ubiquitin-protein ligase component HRD3A 
 vvi-u.5   100256050   ERAD-associated E3 ubiquitin-protein ligase component HRD3A 
 ppo-u.5   7493488   ERAD-associated E3 ubiquitin-protein ligase component HRD3A 
 ppo-u.5   7474823   ERAD-associated E3 ubiquitin-protein ligase component HRD3A 
 mtr-u.5   11415768   ERAD-associated E3 ubiquitin-protein ligase component HRD3A 

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Top 50 coexpressed genes to 100839974 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100839974 (bdi-r.1 coexpression data)

CoexMap"100839974"


bdiLOC100839974 | Entrez gene ID : 100839974      
Species bdi osa zma ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna sbi cre
Paralog 1 1 2 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04141 [list] [network] Protein processing in endoplasmic reticulum (196 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010228849.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  plas 1,  vacu 1,  pero 1  (predict for XP_010228849.1)
Subcellular
localization
TargetP
scret 8,  mito 6  (predict for XP_010228849.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100839974

.
osa-u.5
for
4332310

.
zma-u.5
for
103639339

.
zma-u.5
for
103633963

.
ath-u.5
for
EBS5

.
ath-u.5
for
AT1G73570

.
gma-u.5
for
732556

.
gma-u.5
for
100787823

.
sly-u.5
for
101243872

.
vvi-u.5
for
100256050

.
ppo-u.5
for
7493488

.
ppo-u.5
for
7474823

.
mtr-u.5
for
11415768

.


Ortholog ID: 7805
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EBS5 AT1G73570 LOC100787823 LOC732556 LOC101243872 LOC4332310 LOC103633963 LOC103639339 LOC103872588 LOC103853398 LOC100256050 LOC7493488 LOC7474823 LOC11415768 LOC123085339 LOC123098006 LOC123449107 LOC107904686 LOC107923923 LOC106427147 LOC106346896 CHLRE_03g197400v5 LOC8054310 LOC102594829 LOC102626072 LOC100839974 LOC107799383 LOC107761054
Function* HCP-like superfamily protein HCP-like superfamily protein ERAD-associated E3 ubiquitin-protein ligase component HRD3A SEL-1 ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3-like ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A uncharacterized protein ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3B ERAD-associated E3 ubiquitin-protein ligase component HRD3B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 8
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 11
gma04145 Phagosome 2
gma04120 Ubiquitin mediated proteolysis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 18
gma03060 Protein export 4
gma04145 Phagosome 3
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 10
sly03015 mRNA surveillance pathway 2
sly03250 Viral life cycle - HIV-1 2
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 12
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 11
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 8
vvi00510 N-Glycan biosynthesis 3
vvi04144 Endocytosis 2
vvi05100 Bacterial invasion of epithelial cells 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo00510 N-Glycan biosynthesis 3
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00510 N-Glycan biosynthesis 3
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 12
mtr04145 Phagosome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 13
tae04145 Phagosome 4
tae04120 Ubiquitin mediated proteolysis 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 13
tae04145 Phagosome 4
tae04120 Ubiquitin mediated proteolysis 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 13
sot04145 Phagosome 3
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04141 Protein processing in endoplasmic reticulum 4
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
nta00510 N-Glycan biosynthesis 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
nta00510 N-Glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838406 843691 100787823 732556 101243872 4332310 103633963 103639339 103872588 103853398 100256050 7493488 7474823 11415768 123085339 123098006 123449107 107904686 107923923 106427147 106346896 5718780 8054310 102594829 102626072 100839974 107799383 107761054
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