ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100841531	uncharacterized protein C24H6.02c
bdi-r.1	100844750	uncharacterized LOC100844750
bdi-r.1	104581602	DNL-type zinc finger protein-like
tae-r.2	123070070	uncharacterized LOC123070070
tae-r.2	123078525	uncharacterized LOC123078525
tae-r.2	123107743	uncharacterized protein C24H6.02c
hvu-r.1	123406195	uncharacterized LOC123406195
hvu-r.1	123407755	uncharacterized LOC123407755
hvu-r.1	123441755	uncharacterized LOC123441755
osa-u.5	4324208	uncharacterized LOC4324208
osa-u.5	4342100	uncharacterized LOC4342100
zma-u.5	100283270	uncharacterized LOC100283270
zma-u.5	100192616	uncharacterized LOC100192616
sbi-r.1	8069207	uncharacterized LOC8069207
sbi-r.1	8082217	uncharacterized protein C24H6.02c
ath-u.5	AT5G27280	Zim17-type zinc finger protein
ath-u.5	AT1G68730	Zim17-type zinc finger protein
gma-u.5	100527474	DNL zinc finger protein
gma-u.5	100786613	DNL-type zinc finger protein
gma-u.5	100786955	uncharacterized LOC100786955
sly-u.5	101055605	Hop-interacting protein THI120
sly-u.5	101245544	uncharacterized LOC101245544
bra-r.6	103831284	mitochondrial protein import protein ZIM17
vvi-u.5	100250970	mitochondrial protein import protein ZIM17
vvi-u.5	100243759	uncharacterized LOC100243759
ppo-u.5	7489384	mitochondrial protein import protein ZIM17
ppo-u.5	7494381	uncharacterized LOC7494381
ppo-u.5	7496894	uncharacterized LOC7496894
mtr-u.5	25485647	uncharacterized LOC25485647
mtr-u.5	25492041	uncharacterized LOC25492041
ghi-r.1	107938237	uncharacterized LOC107938237
ghi-r.1	121202971	uncharacterized LOC121202971
ghi-r.1	107946471	uncharacterized LOC107946471
bna-r.1	BNAC02G29950D	uncharacterized BNAC02G29950D
bna-r.1	106406874	mitochondrial protein import protein ZIM17
sot-r.1	102584137	uncharacterized LOC102584137
sot-r.1	102593015	uncharacterized protein C24H6.02c
cit-r.1	102614178	mitochondrial protein import protein ZIM17
cit-r.1	102623239	hypothetical protein
nta-r.1	107800038	uncharacterized LOC107800038
nta-r.1	107811440	uncharacterized LOC107811440
nta-r.1	107802136	uncharacterized LOC107802136
cre-r.1	CHLRE_17g707950v5	uncharacterized protein

Top 50 coexpressed genes to 100841531 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100841531 (bdi-r.1 coexpression data)

CoexMap"100841531"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0050821 [list] [network] protein stabilization	(20 genes)	IEA
GO:0030150 [list] [network] protein import into mitochondrial matrix	(30 genes)	IEA
GO:0006457 [list] [network] protein folding	(168 genes)	IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(524 genes)

IEA

GO MF

GO:0051087 [list] [network] protein-folding chaperone binding	(51 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(707 genes)	IEA

Protein

XP_003569318.1 [sequence] [blastp]
XP_010231998.1 [sequence] [blastp]
XP_024314260.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10	(predict for XP_003569318.1)
chlo 10	(predict for XP_010231998.1)
chlo 10	(predict for XP_024314260.1)

Subcellular
localization
TargetP

chlo 7	(predict for XP_003569318.1)
chlo 7	(predict for XP_010231998.1)
chlo 7	(predict for XP_024314260.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100841531	bdi-r.1 for 100844750	bdi-r.1 for 104581602	tae-r.2 for 123070070	tae-r.2 for 123078525	tae-r.2 for 123107743	hvu-r.1 for 123406195	hvu-r.1 for 123407755	hvu-r.1 for 123441755	osa-u.5 for 4324208	osa-u.5 for 4342100	zma-u.5 for 100283270	zma-u.5 for 100192616	sbi-r.1 for 8069207	sbi-r.1 for 8082217	ath-u.5 for AT5G27280	ath-u.5 for AT1G68730	gma-u.5 for 100527474	gma-u.5 for 100786613	gma-u.5 for 100786955	sly-u.5 for 101055605	sly-u.5 for 101245544	bra-r.6 for 103831284	vvi-u.5 for 100250970	vvi-u.5 for 100243759	ppo-u.5 for 7489384	ppo-u.5 for 7494381	ppo-u.5 for 7496894	mtr-u.5 for 25485647	mtr-u.5 for 25492041	ghi-r.1 for 107938237	ghi-r.1 for 121202971	ghi-r.1 for 107946471	bna-r.1 for BNAC02G29950D	bna-r.1 for 106406874	sot-r.1 for 102584137	sot-r.1 for 102593015	cit-r.1 for 102614178	cit-r.1 for 102623239	nta-r.1 for 107800038	nta-r.1 for 107811440	nta-r.1 for 107802136	cre-r.1 for CHLRE_17g707950v5

Ortholog

Ortholog ID: 2672

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized protein C24H6.02c

uncharacterized LOC100844750

DNL-type zinc finger protein-like

uncharacterized LOC123070070

uncharacterized LOC123078525

uncharacterized LOC123164508

uncharacterized LOC123406195

uncharacterized LOC123407755

uncharacterized LOC123441755

uncharacterized LOC4324208

uncharacterized LOC4342100

uncharacterized LOC100192616

etched 1

uncharacterized LOC8069207

uncharacterized protein C24H6.02c

Zim17-type zinc finger protein

DNL zinc finger protein

uncharacterized LOC100786955

uncharacterized LOC100527113

Hop-interacting protein THI120

uncharacterized LOC101245544

mitochondrial protein import protein ZIM17

uncharacterized LOC100243759

mitochondrial protein import protein ZIM17

uncharacterized LOC7494381

uncharacterized LOC7496894

uncharacterized LOC25485647

uncharacterized LOC25492041

uncharacterized LOC107938237

uncharacterized LOC121202971

uncharacterized LOC107917983

uncharacterized BNAC02G29950D

mitochondrial protein import protein ZIM17-like

uncharacterized LOC102584137

uncharacterized protein C24H6.02c

mitochondrial protein import protein ZIM17

hypothetical protein

uncharacterized LOC107800038

uncharacterized LOC107811440

uncharacterized LOC107802136

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2
zma04122	Sulfur relay system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	2
sbi01240	Biosynthesis of cofactors	2
sbi00230	Purine metabolism	2
sbi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00051	Fructose and mannose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	8
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00340	Histidine metabolism	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

100841531

100844750

104581602

123070070

123078525

123164508

123406195

123407755

123441755

4324208

4342100

100192616

542743

8069207

8082217

832786

843204

100527474

100786955

100527113

101055605

101245544

103831284

100250970

100243759

7489384

7494381

7496894

25485647

25492041

107938237

121202971

107917983

106390156

106354036

102584137

102593015

102614178

102623239

107800038

107811440

107802136

5717182

The preparation time of this page was 0.5 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	2	2	2	2	3	2	1	2	3	2	3	2	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100841531 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100841531 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**