ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100786613	DNL-type zinc finger protein
gma-r.7	100786613	DNL-type zinc finger protein
gma-u.5	100527113	uncharacterized LOC100527113
gma-u.5	100786955	uncharacterized LOC100786955
gma-u.5	100527474	DNL zinc finger protein
mtr-u.5	25492041	uncharacterized LOC25492041
mtr-u.5	25485647	uncharacterized LOC25485647
ppo-u.5	7489384	mitochondrial protein import protein ZIM17
ppo-u.5	7494381	uncharacterized LOC7494381
ppo-u.5	7496894	uncharacterized LOC7496894
ath-u.5	AT5G27280	Zim17-type zinc finger protein
ath-u.5	AT1G68730	Zim17-type zinc finger protein
bra-r.6	103831284	mitochondrial protein import protein ZIM17
vvi-u.5	100250970	mitochondrial protein import protein ZIM17
vvi-u.5	100243759	uncharacterized LOC100243759
ghi-r.1	107938237	uncharacterized LOC107938237
ghi-r.1	121202971	uncharacterized LOC121202971
ghi-r.1	107946471	uncharacterized LOC107946471
bna-r.1	106354036	mitochondrial protein import protein ZIM17-like
bna-r.1	BNAC02G29950D	uncharacterized BNAC02G29950D
cit-r.1	102623239	hypothetical protein
cit-r.1	102614178	mitochondrial protein import protein ZIM17
sly-u.5	101245544	uncharacterized LOC101245544
sly-u.5	101055605	Hop-interacting protein THI120
sot-r.1	102584137	uncharacterized LOC102584137
sot-r.1	102593015	uncharacterized protein C24H6.02c
nta-r.1	107811440	uncharacterized LOC107811440
nta-r.1	107802136	uncharacterized LOC107802136
nta-r.1	107800038	uncharacterized LOC107800038
osa-u.5	4342100	uncharacterized LOC4342100
osa-u.5	4324208	uncharacterized LOC4324208
zma-u.5	100283270	uncharacterized LOC100283270
zma-u.5	100192616	uncharacterized LOC100192616
tae-r.2	123070070	uncharacterized LOC123070070
tae-r.2	123078525	uncharacterized LOC123078525
tae-r.2	123107743	uncharacterized protein C24H6.02c
hvu-r.1	123406195	uncharacterized LOC123406195
hvu-r.1	123407755	uncharacterized LOC123407755
hvu-r.1	123441755	uncharacterized LOC123441755
sbi-r.1	8082217	uncharacterized protein C24H6.02c
sbi-r.1	8069207	uncharacterized LOC8069207
bdi-r.1	100844750	uncharacterized LOC100844750
bdi-r.1	100841531	uncharacterized protein C24H6.02c
bdi-r.1	104581602	DNL-type zinc finger protein-like
cre-r.1	CHLRE_17g707950v5	uncharacterized protein

Top 50 coexpressed genes to 100786613 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100786613 (gma-u.5 coexpression data)

CoexMap"100786613"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0030150 [list] [network] protein import into mitochondrial matrix	(36 genes)	IEA
GO:0050821 [list] [network] protein stabilization	(41 genes)	IEA
GO:0006457 [list] [network] protein folding	(329 genes)	IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(1058 genes)

IEA

GO MF

GO:0051087 [list] [network] protein-folding chaperone binding	(117 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(1182 genes)	IEA

Protein

XP_003518825.1 [sequence] [blastp]
XP_014622361.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_003518825.1)
chlo 9, chlo_mito 5	(predict for XP_014622361.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_003518825.1)
chlo 8	(predict for XP_014622361.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100786613	gma-r.7 for 100786613	gma-u.5 for 100527113	gma-u.5 for 100786955	gma-u.5 for 100527474	mtr-u.5 for 25492041	mtr-u.5 for 25485647	ppo-u.5 for 7489384	ppo-u.5 for 7494381	ppo-u.5 for 7496894	ath-u.5 for AT5G27280	ath-u.5 for AT1G68730	bra-r.6 for 103831284	vvi-u.5 for 100250970	vvi-u.5 for 100243759	ghi-r.1 for 107938237	ghi-r.1 for 121202971	ghi-r.1 for 107946471	bna-r.1 for 106354036	bna-r.1 for BNAC02G29950D	cit-r.1 for 102623239	cit-r.1 for 102614178	sly-u.5 for 101245544	sly-u.5 for 101055605	sot-r.1 for 102584137	sot-r.1 for 102593015	nta-r.1 for 107811440	nta-r.1 for 107802136	nta-r.1 for 107800038	osa-u.5 for 4342100	osa-u.5 for 4324208	zma-u.5 for 100283270	zma-u.5 for 100192616	tae-r.2 for 123070070	tae-r.2 for 123078525	tae-r.2 for 123107743	hvu-r.1 for 123406195	hvu-r.1 for 123407755	hvu-r.1 for 123441755	sbi-r.1 for 8082217	sbi-r.1 for 8069207	bdi-r.1 for 100844750	bdi-r.1 for 100841531	bdi-r.1 for 104581602	cre-r.1 for CHLRE_17g707950v5

Ortholog

Ortholog ID: 2672

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100527113

uncharacterized LOC100786955

DNL zinc finger protein

uncharacterized LOC25492041

uncharacterized LOC25485647

mitochondrial protein import protein ZIM17

uncharacterized LOC7494381

uncharacterized LOC7496894

Zim17-type zinc finger protein

mitochondrial protein import protein ZIM17

uncharacterized LOC100243759

uncharacterized LOC107938237

uncharacterized LOC121202971

uncharacterized LOC107917983

mitochondrial protein import protein ZIM17-like

uncharacterized BNAC02G29950D

hypothetical protein

mitochondrial protein import protein ZIM17

uncharacterized LOC101245544

Hop-interacting protein THI120

uncharacterized LOC102584137

uncharacterized protein C24H6.02c

uncharacterized LOC107811440

uncharacterized LOC107802136

uncharacterized LOC107800038

uncharacterized LOC4342100

uncharacterized LOC4324208

uncharacterized LOC100192616

etched 1

uncharacterized LOC123070070

uncharacterized LOC123078525

uncharacterized LOC123164508

uncharacterized LOC123406195

uncharacterized LOC123407755

uncharacterized LOC123441755

uncharacterized protein C24H6.02c

uncharacterized LOC8069207

uncharacterized LOC100844750

uncharacterized protein C24H6.02c

DNL-type zinc finger protein-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00051	Fructose and mannose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	8
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00340	Histidine metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2
zma04122	Sulfur relay system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	2
sbi01240	Biosynthesis of cofactors	2
sbi00230	Purine metabolism	2
sbi01232	Nucleotide metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100527113

100786955

100527474

25492041

25485647

7489384

7494381

7496894

832786

843204

103831284

100250970

100243759

107938237

121202971

107917983

106354036

106390156

102623239

102614178

101245544

101055605

102584137

102593015

107811440

107802136

107800038

4342100

4324208

100192616

542743

123070070

123078525

123164508

123406195

123407755

123441755

8082217

8069207

100844750

100841531

104581602

5717182

The preparation time of this page was 0.5 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	2	1	2	3	2	2	2	2	3	2	2	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100786613 (gma-u.5 coexpression data)

Top 50 enrichment test to 100786613 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**