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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841617   protein TWIN LOV 1 
 tae-r.2   123077470   protein TWIN LOV 1 
 tae-r.2   123068938   protein TWIN LOV 1 
 tae-r.2   123060404   protein TWIN LOV 1 
 hvu-r.1   123442924   protein TWIN LOV 1 
 osa-u.5   4325659   protein TWIN LOV 1 
 zma-u.5   100216966   uncharacterized LOC100216966 
 sbi-r.1   8078743   protein TWIN LOV 1 
 ath-u.5   PLPB   PAS/LOV protein B 
 gma-u.5   PLP1   PAS/LOV protein 1 
 gma-u.5   PLP2   proteolipid protein 2 (colonic epithelium-enriched) 
 gma-u.5   100776985   protein TWIN LOV 1-like 
 sly-u.5   101255122   protein TWIN LOV 1-like 
 sly-u.5   LLP   LOV/LOV protein 
 bra-r.6   103827512   protein TWIN LOV 1 
 vvi-u.5   100260420   protein TWIN LOV 1 
 ppo-u.5   7494795   protein TWIN LOV 1 
 ppo-u.5   7460504   protein TWIN LOV 1 
 mtr-u.5   11414730   protein TWIN LOV 1 
 ghi-r.1   121225167   protein TWIN LOV 1 
 ghi-r.1   121225164   protein TWIN LOV 1 
 ghi-r.1   107894982   protein TWIN LOV 1 
 bna-r.1   106369339   protein TWIN LOV 1 
 bna-r.1   106410498   protein TWIN LOV 1 
 sot-r.1   102598309   protein TWIN LOV 1 
 sot-r.1   102604395   protein TWIN LOV 1-like 
 cit-r.1   102613871   protein TWIN LOV 1 
 nta-r.1   107760748   protein TWIN LOV 1 
 nta-r.1   107812303   protein TWIN LOV 1 
 nta-r.1   107803743   protein TWIN LOV 1-like 

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Top 50 coexpressed genes to 100841617 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841617 (bdi-r.1 coexpression data)

CoexMap"100841617"


bdiLOC100841617 | Entrez gene ID : 100841617      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 3 2 1 1 2 1 3 2 2 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_003564584.1 [sequence] [blastp]
XP_010230563.1 [sequence] [blastp]
XP_024314330.1 [sequence] [blastp]
XP_024314331.1 [sequence] [blastp]
XP_024314332.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 3,  plas 1,  pero 1,  E.R._vacu 1  (predict for XP_003564584.1)
cyto 4,  cyto_nucl 4,  nucl 3,  plas 1,  pero 1,  E.R._vacu 1  (predict for XP_010230563.1)
cyto 4,  cyto_nucl 4,  nucl 2,  pero 1,  plas 1,  E.R._vacu 1  (predict for XP_024314330.1)
cyto 4,  cyto_nucl 4,  nucl 2,  pero 1,  plas 1,  E.R._vacu 1  (predict for XP_024314331.1)
cyto 6,  cyto_nucl 4,  nucl 2  (predict for XP_024314332.1)
Subcellular
localization
TargetP
other 5  (predict for XP_003564584.1)
other 5  (predict for XP_010230563.1)
other 5  (predict for XP_024314330.1)
other 5  (predict for XP_024314331.1)
other 5  (predict for XP_024314332.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841617
tae-r.2
for
123077470
tae-r.2
for
123068938
tae-r.2
for
123060404
hvu-r.1
for
123442924
osa-u.5
for
4325659
zma-u.5
for
100216966
sbi-r.1
for
8078743
ath-u.5
for
PLPB
gma-u.5
for
PLP1
gma-u.5
for
PLP2
gma-u.5
for
100776985
sly-u.5
for
101255122
sly-u.5
for
LLP
bra-r.6
for
103827512
vvi-u.5
for
100260420
ppo-u.5
for
7494795
ppo-u.5
for
7460504
mtr-u.5
for
11414730
ghi-r.1
for
121225167
ghi-r.1
for
121225164
ghi-r.1
for
107894982
bna-r.1
for
106369339
bna-r.1
for
106410498
sot-r.1
for
102598309
sot-r.1
for
102604395
cit-r.1
for
102613871
nta-r.1
for
107760748
nta-r.1
for
107812303
nta-r.1
for
107803743


Ortholog ID: 7138
Species bdi tae tae tae hvu osa zma sbi ath gma gma gma sly sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot sot cit nta nta nta
Symbol LOC100841617 LOC123077470 LOC123068938 LOC123060404 LOC123442924 LOC4325659 LOC100216966 LOC8078743 PLPB PLP1 PLP2 LOC100776985 LOC101255122 LLP LOC103827512 LOC100260420 LOC7494795 LOC7460504 LOC11414730 LOC121225167 LOC121225164 LOC107894982 LOC106369339 LOC106410498 LOC102598309 LOC102604395 LOC102613871 LOC107760748 LOC107803743 LOC107772552
Function* protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 uncharacterized LOC100216966 protein TWIN LOV 1 PAS/LOV protein B PAS/LOV protein 1 proteolipid protein 2 (colonic epithelium-enriched) protein TWIN LOV 1-like protein TWIN LOV 1-like LOV/LOV protein protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1-like protein TWIN LOV 1 protein TWIN LOV 1 protein TWIN LOV 1-like protein TWIN LOV 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
bdi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00232 Caffeine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae00232 Caffeine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00232 Caffeine metabolism 3
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 3
vvi00310 Lysine degradation 2
vvi00071 Fatty acid degradation 2
vvi01200 Carbon metabolism 2
vvi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00460 Cyanoamino acid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
ghi00460 Cyanoamino acid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
ghi00460 Cyanoamino acid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 6
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841617 123077470 123068938 123060404 123442924 4325659 100216966 8078743 814800 100799855 100785562 100776985 101255122 100529140 103827512 100260420 7494795 7460504 11414730 121225167 121225164 107894982 106369339 106410498 102598309 102604395 102613871 107760748 107803743 107772552
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