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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841629   pentatricopeptide repeat-containing protein At1g05600 
 tae-r.2   123080241   pentatricopeptide repeat-containing protein At1g05600 
 tae-r.2   123063033   pentatricopeptide repeat-containing protein At1g05600 
 hvu-r.1   123442060   pentatricopeptide repeat-containing protein At1g05600-like 
 osa-u.5   4324326   pentatricopeptide repeat-containing protein At1g05600 
 zma-u.5   118473164   pentatricopeptide repeat-containing protein At1g05600 
 sbi-r.1   8063121   pentatricopeptide repeat-containing protein At1g05600 
 ath-u.5   EMB3101   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100803568   pentatricopeptide repeat-containing protein At1g05600 
 sly-u.5   101261725   pentatricopeptide repeat-containing protein At1g05600 
 bra-r.6   103844108   pentatricopeptide repeat-containing protein At1g05600 
 vvi-u.5   100256815   pentatricopeptide repeat-containing protein At1g05600 
 ppo-u.5   7478799   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   11432583   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   11427844   pentatricopeptide repeat-containing protein At1g05600-like 
 ghi-r.1   107945106   pentatricopeptide repeat-containing protein At1g05600 
 bna-r.1   106396999   pentatricopeptide repeat-containing protein At1g05600 
 bna-r.1   106371171   pentatricopeptide repeat-containing protein At1g05600-like 
 sot-r.1   102598656   pentatricopeptide repeat-containing protein At1g05600 
 cit-r.1   102620519   pentatricopeptide repeat-containing protein At1g05600 
 nta-r.1   142164142   pentatricopeptide repeat-containing protein At1g05600-like 
 nta-r.1   142164141   pentatricopeptide repeat-containing protein At1g05600-like 
 nta-r.1   107764001   pentatricopeptide repeat-containing protein At1g05600 

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Top 50 coexpressed genes to 100841629 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841629 (bdi-r.1 coexpression data)

CoexMap"100841629"


bdiLOC100841629 | Entrez gene ID : 100841629      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003567392.3 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  chlo 3,  plas 2,  cyto_E.R. 2  (predict for XP_003567392.3)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_003567392.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841629
tae-r.2
for
123080241
tae-r.2
for
123063033
hvu-r.1
for
123442060
osa-u.5
for
4324326
zma-u.5
for
118473164
sbi-r.1
for
8063121
ath-u.5
for
EMB3101
gma-u.5
for
100803568
sly-u.5
for
101261725
bra-r.6
for
103844108
vvi-u.5
for
100256815
ppo-u.5
for
7478799
mtr-u.5
for
11432583
mtr-u.5
for
11427844
ghi-r.1
for
107945106
bna-r.1
for
106396999
bna-r.1
for
106371171
sot-r.1
for
102598656
cit-r.1
for
102620519
nta-r.1
for
142164142
nta-r.1
for
142164141
nta-r.1
for
107764001


Ortholog ID: 10427
Species bdi tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr mtr ghi bna bna sot cit nta nta nta
Symbol LOC100841629 LOC123080241 LOC123063033 LOC123442060 LOC4324326 LOC118473164 LOC8063121 EMB3101 LOC100803568 LOC101261725 LOC103844108 LOC100256815 LOC7478799 LOC11432583 LOC11427844 LOC107945106 LOC106396999 LOC106371171 LOC102598656 LOC102620519 LOC142164141 LOC107764001 LOC142164313
Function* pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841629 123080241 123063033 123442060 4324326 118473164 8063121 837065 100803568 101261725 103844108 100256815 7478799 11432583 11427844 107945106 106396999 106371171 102598656 102620519 142164141 107764001 142164313
The preparation time of this page was 3.4 [sec].