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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8063121   pentatricopeptide repeat-containing protein At1g05600 
 zma-u.5   118473164   pentatricopeptide repeat-containing protein At1g05600 
 osa-u.5   4324326   pentatricopeptide repeat-containing protein At1g05600 
 ath-u.5   EMB3101   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100803568   pentatricopeptide repeat-containing protein At1g05600 
 sly-u.5   101261725   pentatricopeptide repeat-containing protein At1g05600 
 vvi-u.5   100256815   pentatricopeptide repeat-containing protein At1g05600 
 ppo-u.5   7478799   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   11432583   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   11427844   pentatricopeptide repeat-containing protein At1g05600-like 

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Top 50 coexpressed genes to 8063121 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8063121 (sbi-r.1 coexpression data)

CoexMap"8063121"


sbiLOC8063121 | Entrez gene ID : 8063121      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002458852.1 [sequence] [blastp]
XP_021313303.1 [sequence] [blastp]
XP_021313304.1 [sequence] [blastp]
XP_021313305.1 [sequence] [blastp]
XP_021313306.1 [sequence] [blastp]
XP_021313307.1 [sequence] [blastp]
XP_021313308.1 [sequence] [blastp]
XP_021313309.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002458852.1)
chlo 9  (predict for XP_021313303.1)
chlo 9  (predict for XP_021313304.1)
chlo 9  (predict for XP_021313305.1)
chlo 9  (predict for XP_021313306.1)
chlo 9  (predict for XP_021313307.1)
chlo 9  (predict for XP_021313308.1)
chlo 9  (predict for XP_021313309.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002458852.1)
mito 7  (predict for XP_021313303.1)
mito 7  (predict for XP_021313304.1)
mito 7  (predict for XP_021313305.1)
mito 7  (predict for XP_021313306.1)
mito 7  (predict for XP_021313307.1)
mito 7  (predict for XP_021313308.1)
mito 7  (predict for XP_021313309.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8063121

.
zma-u.5
for
118473164

.
osa-u.5
for
4324326

.
ath-u.5
for
EMB3101

.
gma-u.5
for
100803568

.
sly-u.5
for
101261725

.
vvi-u.5
for
100256815

.
ppo-u.5
for
7478799

.
mtr-u.5
for
11432583

.
mtr-u.5
for
11427844

.


Ortholog ID: 10427
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol EMB3101 LOC100803568 LOC101261725 LOC4324326 LOC118473164 LOC103844108 LOC100256815 LOC7478799 LOC11427844 LOC11432583 LOC123080241 LOC123063033 LOC123442060 LOC107945106 LOC106396999 LOC106371171 LOC8063121 LOC102598656 LOC102620519 LOC100841629 LOC107764001 LOC142164313
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837065 100803568 101261725 4324326 118473164 103844108 100256815 7478799 11427844 11432583 123080241 123063033 123442060 107945106 106396999 106371171 8063121 102598656 102620519 100841629 107764001 142164313
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