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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841877   26S proteasome non-ATPase regulatory subunit 4 homolog 
 tae-r.2   123098091   26S proteasome non-ATPase regulatory subunit 4 homolog 
 tae-r.2   123085192   26S proteasome non-ATPase regulatory subunit 4 homolog 
 tae-r.2   123092794   26S proteasome non-ATPase regulatory subunit 4 homolog 
 hvu-r.1   123449176   26S proteasome non-ATPase regulatory subunit 4 homolog 
 osa-u.5   4332222   26S proteasome non-ATPase regulatory subunit 4 homolog 
 zma-u.5   100382157   uncharacterized LOC100382157 
 zma-u.5   100283637   26S proteasome non-ATPase regulatory subunit 4 
 zma-u.5   100272940   26S proteasome non-ATPase regulatory subunit 4-like protein 
 sbi-r.1   8078860   26S proteasome non-ATPase regulatory subunit 4 homolog 
 ath-u.5   RPN10   regulatory particle non-ATPase 10 
 gma-u.5   100780583   26S proteasome non-ATPase regulatory subunit 4 homolog 
 gma-u.5   100791370   26S proteasome non-ATPase regulatory subunit 4 homolog 
 gma-u.5   100803975   26S proteasome non-ATPase regulatory subunit 4-like 
 sly-u.5   101263071   26S proteasome non-ATPase regulatory subunit 4 homolog 
 bra-r.6   103828090   26S proteasome non-ATPase regulatory subunit 4 homolog 
 bra-r.6   103835173   26S proteasome non-ATPase regulatory subunit 4 homolog 
 vvi-u.5   100257366   26S proteasome non-ATPase regulatory subunit 4 homolog 
 ppo-u.5   7472128   26S proteasome non-ATPase regulatory subunit 4 homolog 
 ppo-u.5   7470392   26S proteasome non-ATPase regulatory subunit 4 homolog 
 ppo-u.5   18101099   26S proteasome non-ATPase regulatory subunit 4 homolog 
 mtr-u.5   11413707   26S proteasome non-ATPase regulatory subunit 4 homolog 
 mtr-u.5   11434921   26S proteasome non-ATPase regulatory subunit 4 homolog 
 ghi-r.1   107909460   26S proteasome non-ATPase regulatory subunit 4 homolog 
 ghi-r.1   107936579   26S proteasome non-ATPase regulatory subunit 4 homolog 
 bna-r.1   125604014   26S proteasome non-ATPase regulatory subunit 4 homolog 
 bna-r.1   106410132   26S proteasome non-ATPase regulatory subunit 4 homolog 
 bna-r.1   106389909   26S proteasome non-ATPase regulatory subunit 4 homolog 
 sot-r.1   102594714   26S proteasome non-ATPase regulatory subunit 4 homolog 
 cit-r.1   102609685   26S proteasome non-ATPase regulatory subunit 4 homolog 
 cit-r.1   102626734   26S proteasome non-ATPase regulatory subunit 4 homolog 
 nta-r.1   107821749   26S proteasome non-ATPase regulatory subunit 4 homolog 
 nta-r.1   107808066   26S proteasome non-ATPase regulatory subunit 4 homolog 
 nta-r.1   107798338   26S proteasome non-ATPase regulatory subunit 4 homolog 
 cre-r.1   CHLRE_16g663500v5   uncharacterized protein 

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Top 50 coexpressed genes to 100841877 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841877 (bdi-r.1 coexpression data)

CoexMap"100841877"


bdiLOC100841877 | Entrez gene ID : 100841877      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 3 1 1 3 1 2 1 3 2 2 3 1 2 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03050 [list] [network] Proteasome (64 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (151 genes)  IEA  
GO CC
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (20 genes)  IEA  
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (24 genes)  IEA  
Protein XP_003558357.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_003558357.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003558357.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841877
tae-r.2
for
123098091
tae-r.2
for
123085192
tae-r.2
for
123092794
hvu-r.1
for
123449176
osa-u.5
for
4332222
zma-u.5
for
100382157
zma-u.5
for
100283637
zma-u.5
for
100272940
sbi-r.1
for
8078860
ath-u.5
for
RPN10
gma-u.5
for
100780583
gma-u.5
for
100791370
gma-u.5
for
100803975
sly-u.5
for
101263071
bra-r.6
for
103828090
bra-r.6
for
103835173
vvi-u.5
for
100257366
ppo-u.5
for
7472128
ppo-u.5
for
7470392
ppo-u.5
for
18101099
mtr-u.5
for
11413707
mtr-u.5
for
11434921
ghi-r.1
for
107909460
ghi-r.1
for
107936579
bna-r.1
for
125604014
bna-r.1
for
106410132
bna-r.1
for
106389909
sot-r.1
for
102594714
cit-r.1
for
102609685
cit-r.1
for
102626734
nta-r.1
for
107821749
nta-r.1
for
107808066
nta-r.1
for
107798338
cre-r.1
for
CHLRE_16g663500v5


Ortholog ID: 3968
Species bdi tae tae tae hvu osa zma zma zma sbi ath gma gma gma sly bra bra vvi ppo ppo ppo mtr mtr ghi ghi bna bna bna sot cit cit nta nta nta cre
Symbol LOC100841877 LOC123098091 LOC123085192 LOC123092794 LOC123449176 LOC4332222 LOC100382157 LOC100283637 LOC100272940 LOC8078860 RPN10 LOC100780583 LOC100791370 LOC100814594 LOC101263071 LOC103828090 LOC103835173 LOC100257366 LOC7472128 LOC7470392 LOC18101099 LOC11413707 LOC11434921 LOC107909460 LOC107936579 LOC106410132 LOC106389909 LOC106349473 LOC102594714 LOC102609685 LOC102626734 LOC107821749 LOC107808066 LOC107798338 CHLRE_16g663500v5
Function* 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog uncharacterized LOC100382157 26S proteasome non-ATPase regulatory subunit 4 26S proteasome non-ATPase regulatory subunit 4-like protein 26S proteasome non-ATPase regulatory subunit 4 homolog regulatory particle non-ATPase 10 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog 26S proteasome non-ATPase regulatory subunit 4 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae04144 Endocytosis 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae03060 Protein export 2
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 10
tae03015 mRNA surveillance pathway 4
tae04382 Cornified envelope formation 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 8
hvu03060 Protein export 3
hvu04144 Endocytosis 3
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma04141 Protein processing in endoplasmic reticulum 3
zma03420 Nucleotide excision repair 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 14
zma04141 Protein processing in endoplasmic reticulum 3
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi03420 Nucleotide excision repair 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03420 Nucleotide excision repair 4
gma04141 Protein processing in endoplasmic reticulum 4
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma01230 Biosynthesis of amino acids 3
gma00261 Monobactam biosynthesis 2
gma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 12
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03083 Polycomb repressive complex 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 9
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna04141 Protein processing in endoplasmic reticulum 3
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 15
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
cit04141 Protein processing in endoplasmic reticulum 3
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03040 Spliceosome 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841877 123098091 123085192 123092794 123449176 4332222 100382157 100283637 100272940 8078860 830019 100780583 100791370 100814594 101263071 103828090 103835173 100257366 7472128 7470392 18101099 11413707 11434921 107909460 107936579 106410132 106389909 106349473 102594714 102609685 102626734 107821749 107808066 107798338 5723522
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