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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100842041   copper transporter 3 
 osa-u.5   4347173   copper transporter 5.1-like 
 osa-u.5   4338846   copper transporter 2-like 
 zma-u.5   103632817   copper transporter 5.1 
 zma-u.5   103646489   copper transporter 6-like 
 ath-u.5   COPT6   Ctr copper transporter family 
 ath-u.5   COPT1   copper transporter 1 
 gma-u.5   100815028   copper transporter 5.1 
 gma-u.5   100808693   copper transporter 2 
 sly-u.5   101260645   copper transporter 6-like 
 sly-u.5   101247486   copper transporter 5 
 vvi-u.5   CTR7   copper transporter 
 vvi-u.5   CTR3   copper transporter 
 ppo-u.5   7468602   copper transporter 1 
 ppo-u.5   7491981   copper transporter 5.1 
 mtr-u.5   11427657   copper transporter 6 
 mtr-u.5   11442243   copper transporter 5.1 

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Top 50 coexpressed genes to 100842041 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100842041 (bdi-r.1 coexpression data)

CoexMap"100842041"


bdiLOC100842041 | Entrez gene ID : 100842041      
Species bdi osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit sot tae bna ghi
Paralog 1 2 2 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006878 [list] [network] intracellular copper ion homeostasis  (5 genes)  IEA  
GO:0035434 [list] [network] copper ion transmembrane transport  (5 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (914 genes)  IEA  
GO MF
GO:0005375 [list] [network] copper ion transmembrane transporter activity  (7 genes)  IEA  
Protein XP_003569917.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  vacu 1,  chlo 1,  E.R._vacu 1  (predict for XP_003569917.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003569917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100842041

.
osa-u.5
for
4347173

.
osa-u.5
for
4338846

.
zma-u.5
for
103632817

.
zma-u.5
for
103646489

.
ath-u.5
for
COPT6

.
ath-u.5
for
COPT1

.
gma-u.5
for
100815028

.
gma-u.5
for
100808693

.
sly-u.5
for
101260645

.
sly-u.5
for
101247486

.
vvi-u.5
for
CTR7

.
vvi-u.5
for
CTR3

.
ppo-u.5
for
7468602

.
ppo-u.5
for
7491981

.
mtr-u.5
for
11427657

.
mtr-u.5
for
11442243

.


Ortholog ID: 356
Species ath ath gma gma sly sly osa zma zma bra vvi ppo tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol COPT2 COPT6 LOC100801036 LOC100805457 LOC101262638 LOC101244986 LOC4324610 LOC103646489 LOC100286321 LOC103856641 CTR3 LOC7468602 LOC123124804 LOC123397297 LOC107894807 LOC121215527 LOC106443264 LOC106433299 CHLRE_05g247050v5 LOC8075294 LOC102606340 LOC102580231 LOC102623246 LOC102619442 LOC100842041 LOC107830556 LOC107802213
Function* copper transporter 2 Ctr copper transporter family copper transporter 5.1 copper transporter 5.1 copper transporter 6 copper transporter 6 copper transporter 1-like copper transporter 6-like copper transporter 1 copper transporter 1-like copper transporter copper transporter 1 copper transporter 5.1 copper transporter 5.1 copper transporter 5 copper transporter 6 copper transporter 1 copper transporter 3-like uncharacterized protein copper transporter 6 copper transporter 6-like copper transporter 6-like copper transporter 5 copper transporter 1 copper transporter 3 copper transporter 6-like uncharacterized LOC107802213
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma04145 Phagosome 7
gma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot04145 Phagosome 4
sot04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823843 817239 100801036 100805457 101262638 101244986 4324610 103646489 100286321 103856641 100244231 7468602 123124804 123397297 107894807 121215527 106443264 106433299 5726486 8075294 102606340 102580231 102623246 102619442 100842041 107830556 107802213
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