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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100842046   F-box protein At3g58530 
 osa-u.5   9267245   F-box protein At3g58530 
 zma-u.5   103626911   F-box protein At3g58530-like 
 sbi-r.1   8080408   F-box protein At3g58530 
 ath-u.5   AT3G58530   RNI-like superfamily protein 
 gma-u.5   100818866   F-box protein At3g58530 
 sly-u.5   101251292   F-box protein At3g58530 
 bra-r.6   103841731   F-box protein At3g58530 
 vvi-u.5   100243447   F-box protein At3g58530 
 ppo-u.5   7479508   F-box protein At3g58530 
 mtr-u.5   25483581   F-box protein At3g58530 
 ghi-r.1   107899211   F-box protein At3g58530 
 ghi-r.1   107948233   F-box protein At3g58530 
 bna-r.1   106368276   F-box protein At3g58530 
 bna-r.1   106403214   F-box protein At3g58530 
 cit-r.1   102614519   F-box protein At3g58530 
 nta-r.1   107773835   F-box protein At3g58530-like 
 nta-r.1   107824559   F-box protein At3g58530 

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Top 50 coexpressed genes to 100842046 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100842046 (bdi-r.1 coexpression data)

CoexMap"100842046"


bdiLOC100842046 | Entrez gene ID : 100842046      
Species bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna cit nta sot cre tae hvu
Paralog 1 1 1 1 1 1 1 1 1 1 1 2 2 1 2 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (62 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (51 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003572520.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  vacu 1,  chlo_mito 1  (predict for XP_003572520.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_003572520.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100842046
osa-u.5
for
9267245
zma-u.5
for
103626911
sbi-r.1
for
8080408
ath-u.5
for
AT3G58530
gma-u.5
for
100818866
sly-u.5
for
101251292
bra-r.6
for
103841731
vvi-u.5
for
100243447
ppo-u.5
for
7479508
mtr-u.5
for
25483581
ghi-r.1
for
107899211
ghi-r.1
for
107948233
bna-r.1
for
106368276
bna-r.1
for
106403214
cit-r.1
for
102614519
nta-r.1
for
107773835
nta-r.1
for
107824559


Ortholog ID: 12661
Species bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna cit nta nta
Symbol LOC100842046 LOC9267245 LOC103626911 LOC8080408 AT3G58530 LOC100818866 LOC101251292 LOC103841731 LOC100243447 LOC7479508 LOC25483581 LOC107899211 LOC107948233 LOC106368276 LOC106403214 LOC102614519 LOC107773835 LOC107824559
Function* F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530-like F-box protein At3g58530 RNI-like superfamily protein F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530 F-box protein At3g58530-like F-box protein At3g58530
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100842046 9267245 103626911 8080408 825022 100818866 101251292 103841731 100243447 7479508 25483581 107899211 107948233 106368276 106403214 102614519 107773835 107824559
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