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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100842330   pentatricopeptide repeat-containing protein At4g14170 
 hvu-r.1   123412756   pentatricopeptide repeat-containing protein At4g14170 
 zma-u.5   100191417   Pentatricopeptide repeat-containing protein 
 sbi-r.1   8085129   pentatricopeptide repeat-containing protein At4g14170 
 ath-u.5   AT4G14170   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103873530   pentatricopeptide repeat-containing protein At4g14170 
 vvi-u.5   100254653   pentatricopeptide repeat-containing protein At4g14170 
 ghi-r.1   107946450   pentatricopeptide repeat-containing protein At4g14170-like 
 ghi-r.1   107934793   pentatricopeptide repeat-containing protein At4g14170 

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Top 50 coexpressed genes to 100842330 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100842330 (bdi-r.1 coexpression data)

CoexMap"100842330"


bdiLOC100842330 | Entrez gene ID : 100842330      
Species bdi hvu zma sbi ath bra vvi ghi gma sot cre ppo sly cit nta tae mtr osa bna
Paralog 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010233224.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  nucl 1,  mito 1  (predict for XP_010233224.1)
Subcellular
localization
TargetP
scret 0  (predict for XP_010233224.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100842330
hvu-r.1
for
123412756
zma-u.5
for
100191417
sbi-r.1
for
8085129
ath-u.5
for
AT4G14170
bra-r.6
for
103873530
vvi-u.5
for
100254653
ghi-r.1
for
107946450
ghi-r.1
for
107934793


Ortholog ID: 13441
Species bdi hvu zma sbi ath bra vvi ghi ghi
Symbol LOC100842330 LOC123412756 LOC100191417 LOC8085129 AT4G14170 LOC103873530 LOC100254653 LOC107946450 LOC107934793
Function* pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g14170 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170-like pentatricopeptide repeat-containing protein At4g14170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 9
ghi00940 Phenylpropanoid biosynthesis 4
ghi04712 Circadian rhythm - plant 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 10
ghi00940 Phenylpropanoid biosynthesis 4
ghi04712 Circadian rhythm - plant 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100842330 123412756 100191417 8085129 827057 103873530 100254653 107946450 107934793
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