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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085129   pentatricopeptide repeat-containing protein At4g14170 
 zma-u.5   100191417   Pentatricopeptide repeat-containing protein 
 ath-u.5   AT4G14170   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100254653   pentatricopeptide repeat-containing protein At4g14170 

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Top 50 coexpressed genes to 8085129 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085129 (sbi-r.1 coexpression data)

CoexMap"8085129"


sbiLOC8085129 | Entrez gene ID : 8085129      
Species sbi zma ath vvi ppo hvu mtr osa sot tae nta bra cit gma ghi bna bdi sly cre
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002439796.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 3,  E.R._plas 3  (predict for XP_002439796.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002439796.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085129

.
zma-u.5
for
100191417

.
ath-u.5
for
AT4G14170

.
vvi-u.5
for
100254653

.


Ortholog ID: 13441
Species ath zma bra vvi hvu ghi ghi sbi bdi
Symbol AT4G14170 LOC100191417 LOC103873530 LOC100254653 LOC123412756 LOC107934793 LOC107946450 LOC8085129 LOC100842330
Function* Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170-like pentatricopeptide repeat-containing protein At4g14170 pentatricopeptide repeat-containing protein At4g14170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 10
ghi00940 Phenylpropanoid biosynthesis 4
ghi04712 Circadian rhythm - plant 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 9
ghi00940 Phenylpropanoid biosynthesis 4
ghi04712 Circadian rhythm - plant 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827057 100191417 103873530 100254653 123412756 107934793 107946450 8085129 100842330
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