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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100843200   F-box/LRR-repeat protein 4 
 tae-r.2   123091802   F-box/LRR-repeat protein 4 
 tae-r.2   123096926   F-box/LRR-repeat protein 4 
 tae-r.2   123085891   F-box/LRR-repeat protein 4 
 hvu-r.1   123448457   F-box/LRR-repeat protein 4 
 osa-u.5   4348113   F-box/LRR-repeat protein 4 
 osa-u.5   4351003   F-box/LRR-repeat protein 4 
 zma-u.5   100382166   uncharacterized LOC100382166 
 sbi-r.1   8079163   F-box/LRR-repeat protein 4 
 ath-u.5   AT4G15475   F-box/RNI-like superfamily protein 
 gma-u.5   100816140   F-box/LRR-repeat protein 4 
 gma-u.5   100812999   F-box/LRR-repeat protein 4 
 gma-u.5   100777126   F-box/LRR-repeat protein 4 
 sly-u.5   101264732   F-box/LRR-repeat protein 4 
 bra-r.6   103860783   F-box/LRR-repeat protein 4 
 vvi-u.5   100254543   F-box/LRR-repeat protein 4 
 mtr-u.5   11446125   F-box/LRR-repeat protein 4 
 ghi-r.1   107929132   F-box/LRR-repeat protein 4 
 ghi-r.1   121206395   F-box/LRR-repeat protein 4 
 bna-r.1   106401790   F-box/LRR-repeat protein 4-like 
 bna-r.1   106440041   F-box/LRR-repeat protein 4 
 sot-r.1   102605788   F-box/LRR-repeat protein 4 
 cit-r.1   102630803   F-box/LRR-repeat protein 4 
 nta-r.1   107806291   uncharacterized LOC107806291 
 nta-r.1   107769148   uncharacterized LOC107769148 
 cre-r.1   CHLRE_14g624000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100843200 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100843200 (bdi-r.1 coexpression data)

CoexMap"100843200"


bdiLOC100843200 | Entrez gene ID : 100843200      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo
Paralog 1 3 1 2 1 1 1 3 1 1 1 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (62 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (51 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003577298.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_003577298.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003577298.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100843200
tae-r.2
for
123091802
tae-r.2
for
123096926
tae-r.2
for
123085891
hvu-r.1
for
123448457
osa-u.5
for
4348113
osa-u.5
for
4351003
zma-u.5
for
100382166
sbi-r.1
for
8079163
ath-u.5
for
AT4G15475
gma-u.5
for
100816140
gma-u.5
for
100812999
gma-u.5
for
100777126
sly-u.5
for
101264732
bra-r.6
for
103860783
vvi-u.5
for
100254543
mtr-u.5
for
11446125
ghi-r.1
for
107929132
ghi-r.1
for
121206395
bna-r.1
for
106401790
bna-r.1
for
106440041
sot-r.1
for
102605788
cit-r.1
for
102630803
nta-r.1
for
107806291
nta-r.1
for
107769148
cre-r.1
for
CHLRE_14g624000v5


Ortholog ID: 9578
Species bdi tae tae tae hvu osa osa zma sbi ath gma gma gma sly bra vvi mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100843200 LOC123091802 LOC123096926 LOC123085891 LOC123448457 LOC4348113 LOC4351003 LOC100382166 LOC8079163 AT4G15475 LOC100816140 LOC100812999 LOC100777126 LOC101264732 LOC103860783 LOC100254543 LOC11446125 LOC107929132 LOC121206395 LOC106401790 LOC106440041 LOC102605788 LOC102630803 LOC107806291 LOC107769148 CHLRE_14g624000v5
Function* F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 uncharacterized LOC100382166 F-box/LRR-repeat protein 4 F-box/RNI-like superfamily protein F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4-like F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 4 uncharacterized LOC107806291 uncharacterized LOC107769148 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100843200 123091802 123096926 123085891 123448457 4348113 4351003 100382166 8079163 827219 100816140 100812999 100777126 101264732 103860783 100254543 11446125 107929132 121206395 106401790 106440041 102605788 102630803 107806291 107769148 5718309
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