ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100843380	golgin subfamily A member 4
tae-r.2	123143800	centromere-associated protein E
tae-r.2	123136298	golgin subfamily A member 4
tae-r.2	123132252	centromere-associated protein E
hvu-r.1	123401178	golgin subfamily B member 1
osa-u.5	4328298	trans-Golgi network-localized SYP41-interacting protein 1
zma-u.5	103626620	sporulation-specific protein 15
zma-u.5	109941124	centrosome-associated protein CEP250-like
sbi-r.1	8074629	centromere-associated protein E
ath-u.5	AT4G31570	nucleoporin
gma-u.5	100818992	golgin subfamily A member 4
gma-u.5	100790179	GRIP and coiled-coil domain-containing protein 2
sly-u.5	101253008	trans-Golgi network-localized SYP41-interacting protein 1
bra-r.6	103851729	early endosome antigen 1
bra-r.6	103862070	protein MLP1
vvi-u.5	100260617	trans-Golgi network-localized SYP41-interacting protein 1
ppo-u.5	7458725	trans-Golgi network-localized SYP41-interacting protein 1
mtr-u.5	11424483	protein MLP1
ghi-r.1	107906784	golgin subfamily A member 4
ghi-r.1	107930834	golgin subfamily A member 4
ghi-r.1	107932988	golgin subfamily A member 4
bna-r.1	106373523	trans-Golgi network-localized SYP41-interacting protein 1
bna-r.1	106375408	early endosome antigen 1
bna-r.1	106420437	golgin subfamily A member 4
sot-r.1	102580782	GRIP and coiled-coil domain-containing protein 2
cit-r.1	102622586	trans-Golgi network-localized SYP41-interacting protein 1
nta-r.1	107804896	uncharacterized LOC107804896
nta-r.1	107832755	uncharacterized LOC107832755

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003574651.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 1, cyto 1, vacu 1, plas 1, golg 1, chlo_mito 1, golg_plas 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_003574651.2)

Subcellular
localization
TargetP

other 8

(predict for XP_003574651.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100843380	tae-r.2 for 123143800	tae-r.2 for 123136298	tae-r.2 for 123132252	hvu-r.1 for 123401178	osa-u.5 for 4328298	zma-u.5 for 103626620	zma-u.5 for 109941124	sbi-r.1 for 8074629	ath-u.5 for AT4G31570	gma-u.5 for 100818992	gma-u.5 for 100790179	sly-u.5 for 101253008	bra-r.6 for 103851729	bra-r.6 for 103862070	vvi-u.5 for 100260617	ppo-u.5 for 7458725	mtr-u.5 for 11424483	ghi-r.1 for 107906784	ghi-r.1 for 107930834	ghi-r.1 for 107932988	bna-r.1 for 106373523	bna-r.1 for 106375408	bna-r.1 for 106420437	sot-r.1 for 102580782	cit-r.1 for 102622586	nta-r.1 for 107804896	nta-r.1 for 107832755

Ortholog

Ortholog ID: 6629

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

golgin subfamily A member 4

centromere-associated protein E

golgin subfamily A member 4

centromere-associated protein E

golgin subfamily B member 1

uncharacterized LOC123443332

trans-Golgi network-localized SYP41-interacting protein 1

sporulation-specific protein 15

centrosome-associated protein CEP250-like

centromere-associated protein E

nucleoporin

golgin subfamily A member 4

GRIP and coiled-coil domain-containing protein 2

trans-Golgi network-localized SYP41-interacting protein 1

early endosome antigen 1

protein MLP1

trans-Golgi network-localized SYP41-interacting protein 1

protein MLP1

golgin subfamily A member 4

nucleoprotein TPR

trans-Golgi network-localized SYP41-interacting protein 1

golgin subfamily A member 4

trans-Golgi network-localized SYP41-interacting protein 1

GRIP and coiled-coil domain-containing protein 2

trans-Golgi network-localized SYP41-interacting protein 1

uncharacterized LOC107804896

uncharacterized LOC107832755

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3
tae04120	Ubiquitin mediated proteolysis	3
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	3
gma03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	3
gma03250	Viral life cycle - HIV-1	3
gma03013	Nucleocytoplasmic transport	2
gma03040	Spliceosome	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	3
ppo04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta03018	RNA degradation	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

100843380

123143800

123136298

123132252

123401178

123443332

4328298

103626620

109941124

8074629

829284

100818992

100790179

101253008

103851729

103862070

100260617

7458725

11424483

107930834

107932988

107937903

106373523

106420437

111198018

102580782

102622586

107804896

107832755

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100843380 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100843380 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	1	2	1	1	2	1	2	1	1	1	3	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100843380 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100843380 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**