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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102622586  trans-Golgi network-localized SYP41-interacting protein 1 
 ath-u.5  AT4G31570  nucleoporin 
 bra-r.6  103851729  early endosome antigen 1 
 bra-r.6  103862070  protein MLP1 
 ghi-r.1  107906784  golgin subfamily A member 4 
 ghi-r.1  107930834  golgin subfamily A member 4 
 ghi-r.1  107932988  golgin subfamily A member 4 
 bna-r.1  106373523  trans-Golgi network-localized SYP41-interacting protein 1 
 bna-r.1  106375408  early endosome antigen 1 
 bna-r.1  106420437  golgin subfamily A member 4 
 gma-u.5  100818992  golgin subfamily A member 4 
 gma-u.5  100790179  GRIP and coiled-coil domain-containing protein 2 
 vvi-u.5  100260617  trans-Golgi network-localized SYP41-interacting protein 1 
 ppo-u.5  7458725  trans-Golgi network-localized SYP41-interacting protein 1 
 mtr-u.5  11424483  protein MLP1 
 sly-u.5  101253008  trans-Golgi network-localized SYP41-interacting protein 1 
 sot-r.1  102580782  GRIP and coiled-coil domain-containing protein 2 
 nta-r.1  107804896  uncharacterized LOC107804896 
 nta-r.1  107832755  uncharacterized LOC107832755 
 osa-u.5  4328298  trans-Golgi network-localized SYP41-interacting protein 1 
 zma-u.5  109941124  centrosome-associated protein CEP250-like 
 zma-u.5  103626620  sporulation-specific protein 15 
 tae-r.2  123143800  centromere-associated protein E 
 tae-r.2  123136298  golgin subfamily A member 4 
 tae-r.2  123132252  centromere-associated protein E 
 hvu-r.1  123401178  golgin subfamily B member 1 
 sbi-r.1  8074629  centromere-associated protein E 
 bdi-r.1  100843380  golgin subfamily A member 4 

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Top 50 coexpressed genes to 102622586 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102622586 (cit-r.1 coexpression data)

CoexMap"102622586"


citLOC102622586 | Entrez gene ID : 102622586
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 3 3 2 1 1 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006483544.1 [sequence] [blastp]
XP_006483545.1 [sequence] [blastp]
XP_006483546.1 [sequence] [blastp]
XP_006483547.1 [sequence] [blastp]
XP_024956777.1 [sequence] [blastp]
Subcellular
localization
wolf
golg 3,  vacu 2,  golg_plas 2,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_006483544.1)
golg 3,  vacu 2,  golg_plas 2,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_006483545.1)
golg 3,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_006483546.1)
golg 3,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_006483547.1)
golg 3,  vacu 2,  golg_plas 2,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_024956777.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006483544.1)
other 7  (predict for XP_006483545.1)
other 8  (predict for XP_006483546.1)
other 8  (predict for XP_006483547.1)
other 7  (predict for XP_024956777.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102622586


ath-u.5
for
AT4G31570


bra-r.6
for
103851729


bra-r.6
for
103862070


ghi-r.1
for
107906784


ghi-r.1
for
107930834


ghi-r.1
for
107932988


bna-r.1
for
106373523


bna-r.1
for
106375408


bna-r.1
for
106420437


gma-u.5
for
100818992


gma-u.5
for
100790179


vvi-u.5
for
100260617


ppo-u.5
for
7458725


mtr-u.5
for
11424483


sly-u.5
for
101253008


sot-r.1
for
102580782


nta-r.1
for
107804896


nta-r.1
for
107832755


osa-u.5
for
4328298


zma-u.5
for
109941124


zma-u.5
for
103626620


tae-r.2
for
123143800


tae-r.2
for
123136298


tae-r.2
for
123132252


hvu-r.1
for
123401178


sbi-r.1
for
8074629


bdi-r.1
for
100843380



Ortholog ID: 6629
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi
Symbol LOC102622586 AT4G31570 LOC103851729 LOC103862070 LOC107930834 LOC107932988 LOC107937903 LOC106373523 LOC106420437 LOC111198018 LOC100818992 LOC100790179 LOC100260617 LOC7458725 LOC11424483 LOC101253008 LOC102580782 LOC107804896 LOC107832755 LOC4328298 LOC109941124 LOC103626620 LOC123143800 LOC123136298 LOC123132252 LOC123401178 LOC123443332 LOC8074629 LOC100843380
Function* trans-Golgi network-localized SYP41-interacting protein 1 nucleoporin early endosome antigen 1 protein MLP1 golgin subfamily A member 4 golgin subfamily A member 4 nucleoprotein TPR trans-Golgi network-localized SYP41-interacting protein 1 golgin subfamily A member 4 trans-Golgi network-localized SYP41-interacting protein 1 golgin subfamily A member 4 GRIP and coiled-coil domain-containing protein 2 trans-Golgi network-localized SYP41-interacting protein 1 trans-Golgi network-localized SYP41-interacting protein 1 protein MLP1 trans-Golgi network-localized SYP41-interacting protein 1 GRIP and coiled-coil domain-containing protein 2 uncharacterized LOC107804896 uncharacterized LOC107832755 trans-Golgi network-localized SYP41-interacting protein 1 centrosome-associated protein CEP250-like sporulation-specific protein 15 centromere-associated protein E golgin subfamily A member 4 centromere-associated protein E golgin subfamily B member 1 uncharacterized LOC123443332 centromere-associated protein E golgin subfamily A member 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 3
ppo04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta03018 RNA degradation 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102622586 829284 103851729 103862070 107930834 107932988 107937903 106373523 106420437 111198018 100818992 100790179 100260617 7458725 11424483 101253008 102580782 107804896 107832755 4328298 109941124 103626620 123143800 123136298 123132252 123401178 123443332 8074629 100843380
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