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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100843561   transcription termination factor MTERF4, chloroplastic 
 bdi-r.1   100825825   transcription termination factor MTERF4, chloroplastic 
 tae-r.2   123055132   transcription termination factor MTERF4, chloroplastic 
 tae-r.2   123128668   transcription termination factor MTERF4, chloroplastic 
 tae-r.2   123132432   transcription termination factor MTERF4, chloroplastic 
 hvu-r.1   123441624   transcription termination factor MTERF4, chloroplastic 
 hvu-r.1   123402712   transcription termination factor MTERF4, chloroplastic 
 osa-u.5   4330939   transcription termination factor MTERF4, chloroplastic-like 
 zma-u.5   100283286   mTERF family protein 
 zma-u.5   100279410   uncharacterized LOC100279410 
 sbi-r.1   8081953   transcription termination factor MTERF4, chloroplastic 
 sbi-r.1   8076879   transcription termination factor MTERF4, chloroplastic 
 ath-u.5   AT2G44020   Mitochondrial transcription termination factor family protein 
 ath-u.5   BSM   Mitochondrial transcription termination factor family protein 
 gma-u.5   100785223   transcription termination factor MTERF4, chloroplastic 
 gma-u.5   100809590   transcription termination factor MTERF4, chloroplastic 
 sly-u.5   101248094   transcription termination factor MTERF4, chloroplastic 
 bra-r.6   103836701   transcription termination factor MTERF4, chloroplastic 
 bra-r.6   103866764   transcription termination factor MTERF4, chloroplastic 
 vvi-u.5   100255927   transcription termination factor MTERF4, chloroplastic 
 vvi-u.5   100249461   transcription termination factor MTERF4, chloroplastic 
 ppo-u.5   7466271   transcription termination factor MTERF4, chloroplastic 
 mtr-u.5   25485717   transcription termination factor MTERF4, chloroplastic 
 mtr-u.5   11426226   transcription termination factor MTERF4, chloroplastic 
 ghi-r.1   107926327   transcription termination factor MTERF4, chloroplastic 
 ghi-r.1   107949027   transcription termination factor MTERF4, chloroplastic 
 bna-r.1   106390925   transcription termination factor MTERF4, chloroplastic-like 
 bna-r.1   BNAC04G03290D   transcription termination factor MTERF4, chloroplastic 
 bna-r.1   106389984   transcription termination factor MTERF4, chloroplastic-like 
 sot-r.1   102592200   uncharacterized LOC102592200 
 sot-r.1   102593486   uncharacterized LOC102593486 
 cit-r.1   102608335   hypothetical protein 
 cit-r.1   102610055   transcription termination factor MTERF4, chloroplastic 
 nta-r.1   107824136   transcription termination factor MTERF4, chloroplastic 
 nta-r.1   107763745   transcription termination factor MTERF4, chloroplastic-like 
 nta-r.1   107786920   transcription termination factor MTERF4, chloroplastic 
 cre-r.1   CHLRE_09g408051v5   uncharacterized protein 

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Top 50 coexpressed genes to 100843561 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100843561 (bdi-r.1 coexpression data)

CoexMap"100843561"


bdiLOC100843561 | Entrez gene ID : 100843561      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 1 2 2 2 2 1 2 2 1 2 2 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1579 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (432 genes)  IEA  
Protein XP_003568480.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_003568480.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003568480.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100843561
bdi-r.1
for
100825825
tae-r.2
for
123055132
tae-r.2
for
123128668
tae-r.2
for
123132432
hvu-r.1
for
123441624
hvu-r.1
for
123402712
osa-u.5
for
4330939
zma-u.5
for
100283286
zma-u.5
for
100279410
sbi-r.1
for
8081953
sbi-r.1
for
8076879
ath-u.5
for
AT2G44020
ath-u.5
for
BSM
gma-u.5
for
100785223
gma-u.5
for
100809590
sly-u.5
for
101248094
bra-r.6
for
103836701
bra-r.6
for
103866764
vvi-u.5
for
100255927
vvi-u.5
for
100249461
ppo-u.5
for
7466271
mtr-u.5
for
25485717
mtr-u.5
for
11426226
ghi-r.1
for
107926327
ghi-r.1
for
107949027
bna-r.1
for
106390925
bna-r.1
for
BNAC04G03290D
bna-r.1
for
106389984
sot-r.1
for
102592200
sot-r.1
for
102593486
cit-r.1
for
102608335
cit-r.1
for
102610055
nta-r.1
for
107824136
nta-r.1
for
107763745
nta-r.1
for
107786920
cre-r.1
for
CHLRE_09g408051v5


Ortholog ID: 3441
Species bdi bdi tae tae tae hvu hvu osa zma zma sbi sbi ath ath gma gma sly bra bra vvi vvi ppo mtr mtr ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC100843561 LOC100825825 LOC123055132 LOC123132432 LOC123145803 LOC123441624 LOC123402712 LOC4330939 LOC100283286 LOC100279410 LOC8081953 LOC8076879 AT2G44020 BSM LOC100785223 LOC100809590 LOC101248094 LOC103836701 LOC103866764 LOC100255927 LOC100249461 LOC7466271 LOC25485717 LOC11426226 LOC107926327 LOC107913085 LOC106390925 BNAC04G03290D BNAC09G00370D LOC102592200 LOC102593486 LOC102608335 LOC102610055 LOC107824136 LOC107763745 LOC107786540 CHLRE_09g408051v5
Function* transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic-like mTERF family protein uncharacterized LOC100279410 transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic uncharacterized LOC102592200 uncharacterized LOC102593486 hypothetical protein transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF4, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100843561 100825825 123055132 123132432 123145803 123441624 123402712 4330939 100283286 100279410 8081953 8076879 819007 828116 100785223 100809590 101248094 103836701 103866764 100255927 100249461 7466271 25485717 11426226 107926327 107913085 106390925 106390605 106392276 102592200 102593486 102608335 102610055 107824136 107763745 107786540 5722410
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