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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25485717   transcription termination factor MTERF4, chloroplastic 
 mtr-r.5   25485717   transcription termination factor MTERF4, chloroplastic 
 mtr-u.5   11426226   transcription termination factor MTERF4, chloroplastic 
 gma-u.5   100785223   transcription termination factor MTERF4, chloroplastic 
 gma-u.5   100809590   transcription termination factor MTERF4, chloroplastic 
 ppo-u.5   7466271   transcription termination factor MTERF4, chloroplastic 
 ath-u.5   AT2G44020   Mitochondrial transcription termination factor family protein 
 ath-u.5   BSM   Mitochondrial transcription termination factor family protein 
 vvi-u.5   100255927   transcription termination factor MTERF4, chloroplastic 
 vvi-u.5   100249461   transcription termination factor MTERF4, chloroplastic 
 sly-u.5   101248094   transcription termination factor MTERF4, chloroplastic 
 osa-u.5   4330939   transcription termination factor MTERF4, chloroplastic-like 
 zma-u.5   100279410   uncharacterized LOC100279410 
 zma-u.5   100283286   mTERF family protein 

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Top 50 coexpressed genes to 25485717 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25485717 (mtr-u.5 coexpression data)

CoexMap"25485717"


mtrLOC25485717 | Entrez gene ID : 25485717      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032502 [list] [network] developmental process  (480 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (549 genes)  IEA  
Protein XP_013470448.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo_mito 5,  cyto_mito 4,  chlo 2  (predict for XP_013470448.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_013470448.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25485717
mtr-r.5
for
25485717
mtr-u.5
for
11426226
gma-u.5
for
100785223
gma-u.5
for
100809590
ppo-u.5
for
7466271
ath-u.5
for
AT2G44020
ath-u.5
for
BSM
vvi-u.5
for
100255927
vvi-u.5
for
100249461
sly-u.5
for
101248094
osa-u.5
for
4330939
zma-u.5
for
100279410
zma-u.5
for
100283286


Ortholog ID: 3441
Species mtr mtr gma gma ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sot sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC25485717 LOC11426226 LOC100785223 LOC100809590 LOC7466271 AT2G44020 BSM LOC103836701 LOC103866764 LOC100249461 LOC100255927 LOC107926327 LOC107913085 BNAC04G03290D LOC106390925 LOC102610055 LOC102608335 LOC101248094 LOC102592200 LOC102593486 LOC107824136 LOC107763745 LOC4330939 LOC100279410 LOC100283286 LOC123132432 LOC123055132 LOC123441624 LOC123402712 LOC8081953 LOC8076879 LOC100843561 LOC100825825 CHLRE_09g408051v5
Function* transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF4, chloroplastic hypothetical protein transcription termination factor MTERF4, chloroplastic uncharacterized LOC102592200 uncharacterized LOC102593486 transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF4, chloroplastic-like uncharacterized LOC100279410 mTERF family protein transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25485717 11426226 100785223 100809590 7466271 819007 828116 103836701 103866764 100249461 100255927 107926327 107913085 106390605 106390925 102610055 102608335 101248094 102592200 102593486 107824136 107763745 4330939 100279410 100283286 123132432 123055132 123441624 123402712 8081953 8076879 100843561 100825825 5722410
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