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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846188   DNA repair protein recA homolog 3, mitochondrial 
 tae-r.2   123071677   DNA repair protein recA homolog 3, mitochondrial 
 tae-r.2   123062829   DNA repair protein recA homolog 3, mitochondrial 
 tae-r.2   123080022   DNA repair protein recA homolog 3, mitochondrial 
 hvu-r.1   123445033   DNA repair protein recA homolog 3, mitochondrial 
 osa-u.5   4325041   DNA repair protein recA homolog 3, mitochondrial 
 osa-u.5   4350329   DNA repair protein recA homolog 3, mitochondrial 
 zma-u.5   100384162   putative recA DNA recombination family protein 
 zma-u.5   100191367   uncharacterized LOC100191367 
 sbi-r.1   8056121   protein RecA 
 ath-u.5   RECA2   recA DNA recombination family protein 
 gma-u.5   100807627   DNA repair protein recA homolog 3, mitochondrial 
 gma-u.5   100798983   DNA repair protein recA homolog 3, mitochondrial 
 sly-u.5   101260233   DNA repair protein recA homolog 3, mitochondrial 
 bra-r.6   103849257   DNA repair protein recA homolog 3, mitochondrial 
 bra-r.6   103842639   DNA repair protein recA homolog 3, mitochondrial 
 vvi-u.5   100257827   DNA repair protein recA homolog 3, mitochondrial 
 ppo-u.5   18107678   DNA repair protein recA homolog 3, mitochondrial 
 ppo-u.5   7497607   DNA repair protein recA homolog 3, mitochondrial 
 mtr-u.5   11440646   DNA repair protein recA homolog 3, mitochondrial 
 mtr-u.5   25494222   DNA repair protein recA homolog 3, mitochondrial 
 ghi-r.1   107897727   DNA repair protein recA homolog 3, mitochondrial 
 ghi-r.1   107932092   DNA repair protein recA homolog 3, mitochondrial 
 ghi-r.1   107901104   DNA repair protein recA homolog 3, mitochondrial 
 bna-r.1   106356751   DNA repair protein recA homolog 3, mitochondrial 
 bna-r.1   106382431   DNA repair protein recA homolog 3, mitochondrial 
 bna-r.1   106369098   DNA repair protein recA homolog 3, mitochondrial 
 sot-r.1   102594430   DNA repair protein recA homolog 3, mitochondrial 
 cit-r.1   102614724   DNA repair protein recA homolog 3, mitochondrial 
 nta-r.1   107805436   DNA repair protein recA homolog 3, mitochondrial 
 nta-r.1   107760769   DNA repair protein recA homolog 3, mitochondrial 

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Top 50 coexpressed genes to 100846188 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846188 (bdi-r.1 coexpression data)

CoexMap"100846188"


bdiLOC100846188 | Entrez gene ID : 100846188      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 2 2 1 1 2 1 2 1 2 2 3 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03440 [list] [network] Homologous recombination (63 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (287 genes)  IEA  
GO CC
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (65 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (417 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_003564854.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for XP_003564854.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_003564854.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846188
tae-r.2
for
123071677
tae-r.2
for
123062829
tae-r.2
for
123080022
hvu-r.1
for
123445033
osa-u.5
for
4325041
osa-u.5
for
4350329
zma-u.5
for
100384162
zma-u.5
for
100191367
sbi-r.1
for
8056121
ath-u.5
for
RECA2
gma-u.5
for
100807627
gma-u.5
for
100798983
sly-u.5
for
101260233
bra-r.6
for
103849257
bra-r.6
for
103842639
vvi-u.5
for
100257827
ppo-u.5
for
18107678
ppo-u.5
for
7497607
mtr-u.5
for
11440646
mtr-u.5
for
25494222
ghi-r.1
for
107897727
ghi-r.1
for
107932092
ghi-r.1
for
107901104
bna-r.1
for
106356751
bna-r.1
for
106382431
bna-r.1
for
106369098
sot-r.1
for
102594430
cit-r.1
for
102614724
nta-r.1
for
107805436
nta-r.1
for
107760769


Ortholog ID: 5946
Species bdi tae tae tae hvu osa osa zma zma sbi ath gma gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit nta nta
Symbol LOC100846188 LOC123071677 LOC123062829 LOC123080022 LOC123445033 LOC4325041 LOC4350329 LOC100384162 LOC100191367 LOC8056121 RECA2 LOC100807627 LOC100798983 LOC100781271 LOC101260233 LOC103849257 LOC103842639 LOC100257827 LOC18107678 LOC7497607 LOC11440646 LOC25494222 LOC107897727 LOC107901104 LOC107893333 LOC106356751 LOC106382431 LOC106369098 LOC102594430 LOC102614724 LOC107805436 LOC107760769
Function* DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial putative recA DNA recombination family protein uncharacterized LOC100191367 protein RecA recA DNA recombination family protein DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial DNA repair protein recA homolog 3, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 3
gma03082 ATP-dependent chromatin remodeling 3
gma03440 Homologous recombination 2
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846188 123071677 123062829 123080022 123445033 4325041 4350329 100384162 100191367 8056121 816468 100807627 100798983 100781271 101260233 103849257 103842639 100257827 18107678 7497607 11440646 25494222 107897727 107901104 107893333 106356751 106382431 106369098 102594430 102614724 107805436 107760769
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