Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123398551   putative pentatricopeptide repeat-containing protein At3g08820 
 osa-u.5   107277707   putative pentatricopeptide repeat-containing protein At3g08820 
 osa-u.5   4351284   putative pentatricopeptide repeat-containing protein At3g08820 
 zma-u.5   103629748   putative pentatricopeptide repeat-containing protein At3g08820 
 sbi-r.1   110429608   putative pentatricopeptide repeat-containing protein At3g08820 
 sbi-r.1   8079983   putative pentatricopeptide repeat-containing protein At3g08820 
 ath-u.5   AT3G08820   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100799205   putative pentatricopeptide repeat-containing protein At3g08820 
 sly-u.5   101258691   putative pentatricopeptide repeat-containing protein At3g08820 
 bra-r.6   103870586   putative pentatricopeptide repeat-containing protein At3g08820 
 vvi-u.5   100256789   putative pentatricopeptide repeat-containing protein At3g08820 
 ppo-u.5   7488758   putative pentatricopeptide repeat-containing protein At3g08820 
 ppo-u.5   7468074   putative pentatricopeptide repeat-containing protein At3g08820 
 mtr-u.5   11422149   putative pentatricopeptide repeat-containing protein At3g08820 
 ghi-r.1   107896290   putative pentatricopeptide repeat-containing protein At3g08820 
 ghi-r.1   107954276   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ghi-r.1   107955864   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 sot-r.1   102604347   putative pentatricopeptide repeat-containing protein At3g08820 
 cit-r.1   102628164   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 cit-r.1   102611004   putative pentatricopeptide repeat-containing protein At3g08820 
 nta-r.1   107773618   putative pentatricopeptide repeat-containing protein At3g08820 

close


Top 50 coexpressed genes to 123398551 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123398551 (hvu-r.1 coexpression data)

CoexMap"100846450"


bdiLOC100846450 | Entrez gene ID : 100846450    
Species hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi sot cit nta bna cre tae bdi
Paralog 1 2 1 2 1 1 1 1 1 2 1 3 1 2 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_024310443.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  pero 2  (predict for XP_024310443.1)
Subcellular
localization
TargetP
other 5  (predict for XP_024310443.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123398551
osa-u.5
for
107277707
osa-u.5
for
4351284
zma-u.5
for
103629748
sbi-r.1
for
110429608
sbi-r.1
for
8079983
ath-u.5
for
AT3G08820
gma-u.5
for
100799205
sly-u.5
for
101258691
bra-r.6
for
103870586
vvi-u.5
for
100256789
ppo-u.5
for
7488758
ppo-u.5
for
7468074
mtr-u.5
for
11422149
ghi-r.1
for
107896290
ghi-r.1
for
107954276
ghi-r.1
for
107955864
sot-r.1
for
102604347
cit-r.1
for
102628164
cit-r.1
for
102611004
nta-r.1
for
107773618


Ortholog ID: 7986
Species hvu osa osa zma sbi sbi ath gma sly bra vvi ppo ppo mtr ghi ghi ghi sot cit cit nta
Symbol LOC123398551 LOC107277707 LOC4351284 LOC103629748 LOC110429608 LOC8079983 AT3G08820 LOC100799205 LOC101258691 LOC103870586 LOC100256789 LOC7488758 LOC7468074 LOC11422149 LOC107896290 LOC107954276 LOC107955864 LOC102604347 LOC102628164 LOC102611004 LOC107773618
Function* putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123398551 107277707 4351284 103629748 110429608 8079983 820029 100799205 101258691 103870586 100256789 7488758 7468074 11422149 107896290 107954276 107955864 102604347 102628164 102611004 107773618
The preparation time of this page was 0.1 [sec].