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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103870586   putative pentatricopeptide repeat-containing protein At3g08820 
 ath-u.5   AT3G08820   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107896290   putative pentatricopeptide repeat-containing protein At3g08820 
 ghi-r.1   107954276   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ghi-r.1   107955864   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 cit-r.1   102628164   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 cit-r.1   102611004   putative pentatricopeptide repeat-containing protein At3g08820 
 gma-u.5   100799205   putative pentatricopeptide repeat-containing protein At3g08820 
 vvi-u.5   100256789   putative pentatricopeptide repeat-containing protein At3g08820 
 ppo-u.5   7468074   putative pentatricopeptide repeat-containing protein At3g08820 
 ppo-u.5   7488758   putative pentatricopeptide repeat-containing protein At3g08820 
 mtr-u.5   11422149   putative pentatricopeptide repeat-containing protein At3g08820 
 sly-u.5   101258691   putative pentatricopeptide repeat-containing protein At3g08820 
 sot-r.1   102604347   putative pentatricopeptide repeat-containing protein At3g08820 
 nta-r.1   107773618   putative pentatricopeptide repeat-containing protein At3g08820 
 osa-u.5   107277707   putative pentatricopeptide repeat-containing protein At3g08820 
 osa-u.5   4351284   putative pentatricopeptide repeat-containing protein At3g08820 
 zma-u.5   103629748   putative pentatricopeptide repeat-containing protein At3g08820 
 hvu-r.1   123398551   putative pentatricopeptide repeat-containing protein At3g08820 
 sbi-r.1   8079983   putative pentatricopeptide repeat-containing protein At3g08820 
 sbi-r.1   110429608   putative pentatricopeptide repeat-containing protein At3g08820 

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Top 50 coexpressed genes to 103870586 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103870586 (bra-r.6 coexpression data)

CoexMap"103870586"


braLOC103870586 | Entrez gene ID : 103870586    
Species bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae bna
Paralog 1 1 3 2 1 1 2 1 1 1 1 2 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009146978.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  cyto_nucl 3,  nucl 1,  chlo_mito 1  (predict for XP_009146978.1)
Subcellular
localization
TargetP
other 4  (predict for XP_009146978.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103870586
ath-u.5
for
AT3G08820
ghi-r.1
for
107896290
ghi-r.1
for
107954276
ghi-r.1
for
107955864
cit-r.1
for
102628164
cit-r.1
for
102611004
gma-u.5
for
100799205
vvi-u.5
for
100256789
ppo-u.5
for
7468074
ppo-u.5
for
7488758
mtr-u.5
for
11422149
sly-u.5
for
101258691
sot-r.1
for
102604347
nta-r.1
for
107773618
osa-u.5
for
107277707
osa-u.5
for
4351284
zma-u.5
for
103629748
hvu-r.1
for
123398551
sbi-r.1
for
8079983
sbi-r.1
for
110429608


Ortholog ID: 7986
Species bra ath ghi ghi ghi cit cit gma vvi ppo ppo mtr sly sot nta osa osa zma hvu sbi sbi
Symbol LOC103870586 AT3G08820 LOC107896290 LOC107954276 LOC107955864 LOC102628164 LOC102611004 LOC100799205 LOC100256789 LOC7468074 LOC7488758 LOC11422149 LOC101258691 LOC102604347 LOC107773618 LOC107277707 LOC4351284 LOC103629748 LOC123398551 LOC8079983 LOC110429608
Function* putative pentatricopeptide repeat-containing protein At3g08820 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103870586 820029 107896290 107954276 107955864 102628164 102611004 100799205 100256789 7468074 7488758 11422149 101258691 102604347 107773618 107277707 4351284 103629748 123398551 8079983 110429608
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