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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079983   putative pentatricopeptide repeat-containing protein At3g08820 
 zma-u.5   103629748   putative pentatricopeptide repeat-containing protein At3g08820 
 osa-u.5   107277707   putative pentatricopeptide repeat-containing protein At3g08820 
 osa-u.5   4351284   putative pentatricopeptide repeat-containing protein At3g08820 
 ath-u.5   AT3G08820   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100799205   putative pentatricopeptide repeat-containing protein At3g08820 
 sly-u.5   101258691   putative pentatricopeptide repeat-containing protein At3g08820 
 vvi-u.5   100256789   putative pentatricopeptide repeat-containing protein At3g08820 
 ppo-u.5   7488758   putative pentatricopeptide repeat-containing protein At3g08820 
 ppo-u.5   7468074   putative pentatricopeptide repeat-containing protein At3g08820 
 mtr-u.5   11422149   putative pentatricopeptide repeat-containing protein At3g08820 

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Top 50 coexpressed genes to 8079983 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079983 (sbi-r.1 coexpression data)

CoexMap"8079983"


sbiLOC8079983 | Entrez gene ID : 8079983    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002450116.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_002450116.2)
Subcellular
localization
TargetP
other 5  (predict for XP_002450116.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079983

.
zma-u.5
for
103629748

.
osa-u.5
for
107277707

.
osa-u.5
for
4351284

.
ath-u.5
for
AT3G08820

.
gma-u.5
for
100799205

.
sly-u.5
for
101258691

.
vvi-u.5
for
100256789

.
ppo-u.5
for
7488758

.
ppo-u.5
for
7468074

.
mtr-u.5
for
11422149

.


Ortholog ID: 7986
Species ath gma sly osa osa zma bra vvi ppo ppo mtr hvu ghi ghi sbi sbi sot cit cit nta
Symbol AT3G08820 LOC100799205 LOC101258691 LOC4351284 LOC107277707 LOC103629748 LOC103870586 LOC100256789 LOC7468074 LOC7488758 LOC11422149 LOC123398551 LOC107954276 LOC107955864 LOC8079983 LOC110429608 LOC102604347 LOC102611004 LOC102628164 LOC107773618
Function* Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g08820
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820029 100799205 101258691 4351284 107277707 103629748 103870586 100256789 7468074 7488758 11422149 123398551 107954276 107955864 8079983 110429608 102604347 102611004 102628164 107773618
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