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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101243859   protein TRAUCO 
 sly-r.6   101243859   protein TRAUCO 
 sly-m.5   101243859   protein TRAUCO 
 sot-r.1   102592430   protein TRAUCO 
 nta-r.1   107832330   protein TRAUCO-like 
 nta-r.1   107828915   protein TRAUCO 
 ath-u.5   TRO   TRAUCO 
 gma-u.5   100816796   protein TRAUCO 
 gma-u.5   100796715   protein TRAUCO 
 bra-r.6   103871284   protein TRAUCO 
 vvi-u.5   100255238   protein TRAUCO 
 ppo-u.5   7485742   protein TRAUCO 
 ppo-u.5   7482332   protein TRAUCO 
 mtr-u.5   11442855   protein TRAUCO 
 ghi-r.1   107891419   protein TRAUCO 
 ghi-r.1   107889322   protein TRAUCO 
 bna-r.1   106389745   protein TRAUCO 
 bna-r.1   106346064   protein TRAUCO 
 cit-r.1   102613335   protein TRAUCO 
 osa-u.5   9268228   protein TRAUCO 
 osa-u.5   4349761   protein TRAUCO 
 zma-u.5   103631512   protein TRAUCO 
 zma-u.5   100192531   uncharacterized LOC100192531 
 tae-r.2   123103039   protein TRAUCO 
 tae-r.2   123111165   protein TRAUCO-like 
 tae-r.2   123111212   protein TRAUCO 
 hvu-r.1   123453107   protein TRAUCO-like 
 sbi-r.1   8069301   protein TRAUCO 
 bdi-r.1   100829546   protein TRAUCO 
 cre-r.1   CHLRE_16g670250v5   uncharacterized protein 

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Top 50 coexpressed genes to 101243859 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101243859 (sly-u.5 coexpression data)

CoexMap"101243859"


slyLOC101243859 | Entrez gene ID : 101243859    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 1 2 1 2 2 1 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (5 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (435 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004250921.1 [sequence] [blastp]
XP_010313265.1 [sequence] [blastp]
XP_069147228.1 [sequence] [blastp]
XP_069147229.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  cysk 1  (predict for XP_004250921.1)
nucl 6,  cyto 1,  cysk 1  (predict for XP_010313265.1)
nucl 6,  cyto 1,  cysk 1  (predict for XP_069147228.1)
nucl 8,  cyto 1  (predict for XP_069147229.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004250921.1)
other 8  (predict for XP_010313265.1)
other 8  (predict for XP_069147228.1)
other 8  (predict for XP_069147229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101243859
sly-r.6
for
101243859
sly-m.5
for
101243859
sot-r.1
for
102592430
nta-r.1
for
107832330
nta-r.1
for
107828915
ath-u.5
for
TRO
gma-u.5
for
100816796
gma-u.5
for
100796715
bra-r.6
for
103871284
vvi-u.5
for
100255238
ppo-u.5
for
7485742
ppo-u.5
for
7482332
mtr-u.5
for
11442855
ghi-r.1
for
107891419
ghi-r.1
for
107889322
bna-r.1
for
106389745
bna-r.1
for
106346064
cit-r.1
for
102613335
osa-u.5
for
9268228
osa-u.5
for
4349761
zma-u.5
for
103631512
zma-u.5
for
100192531
tae-r.2
for
123103039
tae-r.2
for
123111165
tae-r.2
for
123111212
hvu-r.1
for
123453107
sbi-r.1
for
8069301
bdi-r.1
for
100829546
cre-r.1
for
CHLRE_16g670250v5


Ortholog ID: 6420
Species sly sot nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC101243859 LOC102592430 LOC107832330 LOC107828915 TRO LOC100816796 LOC100796715 LOC103871284 LOC100255238 LOC7485742 LOC7482332 LOC11442855 LOC107891419 LOC107889322 LOC106389745 LOC106346064 LOC102613335 LOC9268228 LOC4349761 LOC103631512 LOC100192531 LOC123103039 LOC123111212 LOC123120314 LOC123453107 LOC8069301 LOC100829546 CHLRE_16g670250v5
Function* protein TRAUCO protein TRAUCO protein TRAUCO-like protein TRAUCO TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO uncharacterized LOC100192531 protein TRAUCO protein TRAUCO protein TRAUCO protein TRAUCO-like protein TRAUCO protein TRAUCO uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi04120 Ubiquitin mediated proteolysis 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi04120 Ubiquitin mediated proteolysis 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit00640 Propanoate metabolism 2
cit01200 Carbon metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101243859 102592430 107832330 107828915 841570 100816796 100796715 103871284 100255238 7485742 7482332 11442855 107891419 107889322 106389745 106346064 102613335 9268228 4349761 103631512 100192531 123103039 123111212 123120314 123453107 8069301 100829546 5724730
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