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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245512   tRNA-dihydrouridine synthase 1-like protein 
 sly-r.6   101245512   tRNA-dihydrouridine synthase 1-like protein 
 sly-u.5   101247588   uncharacterized LOC101247588 
 sot-r.1   102583164   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 sot-r.1   102579683   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 nta-r.1   107820692   uncharacterized LOC107820692 
 nta-r.1   107810562   uncharacterized LOC107810562 
 nta-r.1   107798052   uncharacterized LOC107798052 
 ath-u.5   AT5G67220   FMN-linked oxidoreductases superfamily protein 
 gma-u.5   100812753   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 gma-u.5   100789809   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 bra-r.6   103837738   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 bra-r.6   103829527   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 vvi-u.5   100249291   uncharacterized LOC100249291 
 ppo-u.5   7483096   uncharacterized LOC7483096 
 mtr-u.5   25493484   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 ghi-r.1   107931692   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 ghi-r.1   107932593   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 bna-r.1   106439919   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 bna-r.1   106366303   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 bna-r.1   106360725   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 cit-r.1   102626482   uncharacterized LOC102626482 
 osa-u.5   4342049   uncharacterized LOC4342049 
 zma-u.5   100274382   FMN-linked oxidoreductase superfamily protein 
 tae-r.2   123166974   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 tae-r.2   123156509   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 tae-r.2   123148256   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 hvu-r.1   123410196   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 sbi-r.1   8064984   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 bdi-r.1   100834475   tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like 
 cre-r.1   CHLRE_12g486900v5   uncharacterized protein 

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Top 50 coexpressed genes to 101245512 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245512 (sly-u.5 coexpression data)

CoexMap"101245512"


slyLOC101245512 | Entrez gene ID : 101245512      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 3 1 2 2 1 1 1 2 3 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008033 [list] [network] tRNA processing  (124 genes)  IEA  
GO CC
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (7 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (141 genes)  IEA  
Protein NP_001333857.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  golg 1  (predict for NP_001333857.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001333857.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245512
sly-r.6
for
101245512
sly-u.5
for
101247588
sot-r.1
for
102583164
sot-r.1
for
102579683
nta-r.1
for
107820692
nta-r.1
for
107810562
nta-r.1
for
107798052
ath-u.5
for
AT5G67220
gma-u.5
for
100812753
gma-u.5
for
100789809
bra-r.6
for
103837738
bra-r.6
for
103829527
vvi-u.5
for
100249291
ppo-u.5
for
7483096
mtr-u.5
for
25493484
ghi-r.1
for
107931692
ghi-r.1
for
107932593
bna-r.1
for
106439919
bna-r.1
for
106366303
bna-r.1
for
106360725
cit-r.1
for
102626482
osa-u.5
for
4342049
zma-u.5
for
100274382
tae-r.2
for
123166974
tae-r.2
for
123156509
tae-r.2
for
123148256
hvu-r.1
for
123410196
sbi-r.1
for
8064984
bdi-r.1
for
100834475
cre-r.1
for
CHLRE_12g486900v5


Ortholog ID: 7015
Species sly sly sot sot nta nta nta ath gma gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101245512 LOC101247588 LOC102583164 LOC102579683 LOC107810562 LOC107798052 LOC107817793 AT5G67220 LOC100812753 LOC100789809 LOC103837738 LOC103829527 LOC100249291 LOC7483096 LOC25493484 LOC107931692 LOC107932593 LOC106366303 LOC106360725 LOC106390335 LOC102626482 LOC4342049 LOC100274382 LOC123166974 LOC123156509 LOC123148256 LOC123410196 LOC8064984 LOC100834475 CHLRE_12g486900v5
Function* tRNA-dihydrouridine synthase 1-like protein uncharacterized LOC101247588 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like uncharacterized LOC107810562 uncharacterized LOC107798052 uncharacterized LOC107817793 FMN-linked oxidoreductases superfamily protein tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like uncharacterized LOC100249291 uncharacterized LOC7483096 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like uncharacterized LOC102626482 uncharacterized LOC4342049 FMN-linked oxidoreductase superfamily protein tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly00970 Aminoacyl-tRNA biosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03010 Ribosome 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath01210 2-Oxocarboxylic acid metabolism 3
ath03083 Polycomb repressive complex 2
ath00270 Cysteine and methionine metabolism 2
ath00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00730 Thiamine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245512 101247588 102583164 102579683 107810562 107798052 107817793 836857 100812753 100789809 103837738 103829527 100249291 7483096 25493484 107931692 107932593 106366303 106360725 106390335 102626482 4342049 100274382 123166974 123156509 123148256 123410196 8064984 100834475 5716635
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