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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245890   ATP phosphoribosyltransferase 2, chloroplastic 
 sly-r.6   101245890   ATP phosphoribosyltransferase 2, chloroplastic 
 sly-m.5   101245890   ATP phosphoribosyltransferase 2, chloroplastic 
 ath-u.5   ATP-PRT2   ATP phosphoribosyl transferase 2 
 ath-u.5   ATP-PRT1   ATP phosphoribosyl transferase 1 
 gma-u.5   100817490   ATP phosphoribosyltransferase 
 gma-u.5   100792493   ATP phosphoribosyltransferase 2, chloroplastic 
 vvi-u.5   100256118   ATP phosphoribosyltransferase 2, chloroplastic 
 ppo-u.5   7455230   ATP phosphoribosyltransferase 2, chloroplastic 
 ppo-u.5   18098303   ATP phosphoribosyltransferase 2, chloroplastic 
 mtr-u.5   11438625   ATP phosphoribosyltransferase 2, chloroplastic 
 mtr-u.5   11421591   ATP phosphoribosyltransferase 2, chloroplastic 
 osa-u.5   4331530   ATP phosphoribosyltransferase, chloroplastic-like 
 zma-u.5   100193253   ATP phosphoribosyltransferase 2 chloroplastic 

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Top 50 coexpressed genes to 101245890 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245890 (sly-u.5 coexpression data)

CoexMap"101245890"


slyLOC101245890 | Entrez gene ID : 101245890      
Species sly ath gma vvi ppo mtr osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 3 2 2 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00340 [list] [network] Histidine metabolism (18 genes)
sly01230 [list] [network] Biosynthesis of amino acids (226 genes)
GO BP
GO:0000105 [list] [network] L-histidine biosynthetic process  (7 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0003879 [list] [network] ATP phosphoribosyltransferase activity  (1 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (121 genes)  IEA  
Protein XP_004230464.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_004230464.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_004230464.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245890

.
sly-r.6
for
101245890

.
sly-m.5
for
101245890

.
ath-u.5
for
ATP-PRT2

.
ath-u.5
for
ATP-PRT1

.
gma-u.5
for
100817490

.
gma-u.5
for
100792493

.
vvi-u.5
for
100256118

.
ppo-u.5
for
7455230

.
ppo-u.5
for
18098303

.
mtr-u.5
for
11438625

.
mtr-u.5
for
11421591

.
osa-u.5
for
4331530

.
zma-u.5
for
100193253

.


Ortholog ID: 5399
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ATP-PRT2 ATP-PRT1 LOC100817490 LOC100792493 LOC101245890 LOC4331530 LOC100193253 LOC103871753 LOC103838635 LOC100256118 LOC18098303 LOC7455230 LOC11438625 LOC11421591 LOC123098900 LOC123105841 LOC123449752 LOC107898690 LOC107913812 LOC106346246 LOC111212899 CHLRE_09g410650v5 LOC110432925 LOC102596899 LOC102610975 LOC100821967 LOC107781436 LOC107792258
Function* ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase 1 ATP phosphoribosyltransferase ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase, chloroplastic-like ATP phosphoribosyltransferase 2 chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 1, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase, chloroplastic ATP phosphoribosyltransferase, chloroplastic ATP phosphoribosyltransferase, chloroplastic-like ATP phosphoribosyltransferase 1, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 1, chloroplastic-like uncharacterized protein ATP phosphoribosyltransferase, chloroplastic-like ATP phosphoribosyltransferase 2, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic-like ATP phosphoribosyltransferase, chloroplastic ATP phosphoribosyltransferase 2, chloroplastic-like ATP phosphoribosyltransferase 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 5
ath00910 Nitrogen metabolism 4
ath01240 Biosynthesis of cofactors 3
ath01310 Nitrogen cycle 3
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 7
gma01200 Carbon metabolism 4
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00740 Riboflavin metabolism 3
gma01240 Biosynthesis of cofactors 3
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00970 Aminoacyl-tRNA biosynthesis 3
sly00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00970 Aminoacyl-tRNA biosynthesis 4
osa01210 2-Oxocarboxylic acid metabolism 4
osa00290 Valine, leucine and isoleucine biosynthesis 3
osa00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma03010 Ribosome 5
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra01230 Biosynthesis of amino acids 3
bra00785 Lipoic acid metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 10
vvi03010 Ribosome 5
vvi01200 Carbon metabolism 3
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03015 mRNA surveillance pathway 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr00564 Glycerophospholipid metabolism 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00240 Pyrimidine metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00270 Cysteine and methionine metabolism 9
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00340 Histidine metabolism 3
tae00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae00270 Cysteine and methionine metabolism 7
tae00290 Valine, leucine and isoleucine biosynthesis 6
tae00770 Pantothenate and CoA biosynthesis 6
tae01210 2-Oxocarboxylic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 5
ghi01230 Biosynthesis of amino acids 4
ghi00340 Histidine metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 5
bna00340 Histidine metabolism 2
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre01210 2-Oxocarboxylic acid metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 9
sbi04145 Phagosome 9
sbi04142 Lysosome 3
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 12
sot01210 2-Oxocarboxylic acid metabolism 5
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01200 Carbon metabolism 4
sot00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit01240 Biosynthesis of cofactors 2
cit00220 Arginine biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00030 Pentose phosphate pathway 4
bdi01200 Carbon metabolism 4
bdi00270 Cysteine and methionine metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta01200 Carbon metabolism 7
nta00270 Cysteine and methionine metabolism 6
nta00620 Pyruvate metabolism 6
nta00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta01200 Carbon metabolism 7
nta00270 Cysteine and methionine metabolism 6
nta00620 Pyruvate metabolism 6
nta00710 Carbon fixation by Calvin cycle 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837509 842175 100817490 100792493 101245890 4331530 100193253 103871753 103838635 100256118 18098303 7455230 11438625 11421591 123098900 123105841 123449752 107898690 107913812 106346246 111212899 66054882 110432925 102596899 102610975 100821967 107781436 107792258
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