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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246211   pentatricopeptide repeat-containing protein 
 sly-r.6   101246211   pentatricopeptide repeat-containing protein 
 sot-r.1   102579317   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 nta-r.1   107789909   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 nta-r.1   107823728   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ath-u.5   OTP51   endonuclease 
 gma-u.5   100807730   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 gma-u.5   100803872   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 bra-r.6   103844343   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 vvi-u.5   100258959   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ppo-u.5   18097832   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ppo-u.5   7457516   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 mtr-u.5   25482209   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ghi-r.1   107943306   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ghi-r.1   107928892   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 bna-r.1   106445623   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 bna-r.1   106411539   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 cit-r.1   102612069   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 osa-u.5   4330440   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 zma-u.5   100382871   uncharacterized LOC100382871 
 tae-r.2   123145195   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 tae-r.2   123137893   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 tae-r.2   123128106   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 hvu-r.1   123402537   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 sbi-r.1   8073870   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 bdi-r.1   100843266   pentatricopeptide repeat-containing protein OTP51, chloroplastic 

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Top 50 coexpressed genes to 101246211 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246211 (sly-u.5 coexpression data)

CoexMap"101246211"


slyLOC101246211 | Entrez gene ID : 101246211      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 2 1 2 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048564 [list] [network] photosystem I assembly  (7 genes)  IEA  
GO:0000373 [list] [network] Group II intron splicing  (8 genes)  IEA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (19 genes)  IEA  
GO CC
GO MF
GO:0004519 [list] [network] endonuclease activity  (284 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_019066603.1 [sequence] [blastp]
XP_019066604.1 [sequence] [blastp]
XP_025884167.1 [sequence] [blastp]
XP_025884168.1 [sequence] [blastp]
XP_025884169.1 [sequence] [blastp]
XP_025884170.1 [sequence] [blastp]
XP_025884171.1 [sequence] [blastp]
XP_069147649.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_019066603.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_019066604.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_025884167.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_025884168.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_025884169.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_025884170.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_025884171.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_069147649.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_019066603.1)
chlo 9  (predict for XP_019066604.1)
chlo 9  (predict for XP_025884167.1)
chlo 9  (predict for XP_025884168.1)
chlo 9  (predict for XP_025884169.1)
chlo 9  (predict for XP_025884170.1)
chlo 9  (predict for XP_025884171.1)
chlo 9  (predict for XP_069147649.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246211
sly-r.6
for
101246211
sot-r.1
for
102579317
nta-r.1
for
107789909
nta-r.1
for
107823728
ath-u.5
for
OTP51
gma-u.5
for
100807730
gma-u.5
for
100803872
bra-r.6
for
103844343
vvi-u.5
for
100258959
ppo-u.5
for
18097832
ppo-u.5
for
7457516
mtr-u.5
for
25482209
ghi-r.1
for
107943306
ghi-r.1
for
107928892
bna-r.1
for
106445623
bna-r.1
for
106411539
cit-r.1
for
102612069
osa-u.5
for
4330440
zma-u.5
for
100382871
tae-r.2
for
123145195
tae-r.2
for
123137893
tae-r.2
for
123128106
hvu-r.1
for
123402537
sbi-r.1
for
8073870
bdi-r.1
for
100843266


Ortholog ID: 9982
Species sly sot nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101246211 LOC102579317 LOC107789909 LOC107823728 OTP51 LOC100807730 LOC100803872 LOC103844343 LOC100258959 LOC18097832 LOC7457516 LOC25482209 LOC107943306 LOC107928892 LOC106445623 LOC106411539 LOC102612069 LOC4330440 LOC100382871 LOC123145195 LOC123137893 LOC123128106 LOC123402537 LOC8073870 LOC100843266
Function* pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic endonuclease pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic uncharacterized LOC100382871 pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00230 Purine metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta01240 Biosynthesis of cofactors 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101246211 102579317 107789909 107823728 816078 100807730 100803872 103844343 100258959 18097832 7457516 25482209 107943306 107928892 106445623 106411539 102612069 4330440 100382871 123145195 123137893 123128106 123402537 8073870 100843266
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