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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106411539   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ath-u.5   OTP51   endonuclease 
 gma-u.5   100807730   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 gma-u.5   100803872   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 vvi-u.5   100258959   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ppo-u.5   18097832   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 ppo-u.5   7457516   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 mtr-u.5   25482209   pentatricopeptide repeat-containing protein At2g15820, chloroplastic 
 sly-u.5   101246211   pentatricopeptide repeat-containing protein 
 osa-u.5   4330440   pentatricopeptide repeat-containing protein OTP51, chloroplastic 
 zma-u.5   100382871   uncharacterized LOC100382871 

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Top 50 coexpressed genes to 106411539 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106411539 (bna-r.1 coexpression data)

CoexMap"106411539"


bnaLOC106411539 | Entrez gene ID : 106411539    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000373 [list] [network] Group II intron splicing  (16 genes)  IEA  
GO:0048564 [list] [network] photosystem I assembly  (29 genes)  IEA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (62 genes)  IEA  
GO CC
GO MF
GO:0004519 [list] [network] endonuclease activity  (1036 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013707778.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013707778.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013707778.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106411539
ath-u.5
for
OTP51
gma-u.5
for
100807730
gma-u.5
for
100803872
vvi-u.5
for
100258959
ppo-u.5
for
18097832
ppo-u.5
for
7457516
mtr-u.5
for
25482209
sly-u.5
for
101246211
osa-u.5
for
4330440
zma-u.5
for
100382871


Ortholog ID: 9982
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106411539 LOC106445623 LOC103844343 OTP51 LOC107928892 LOC107943306 LOC102612069 LOC100803872 LOC100807730 LOC100258959 LOC18097832 LOC7457516 LOC25482209 LOC101246211 LOC102579317 LOC107789909 LOC107823728 LOC4330440 LOC100382871 LOC123128106 LOC123137893 LOC123402537 LOC8073870 LOC100843266
Function* pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic endonuclease pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein At2g15820, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic uncharacterized LOC100382871 pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic pentatricopeptide repeat-containing protein OTP51, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00230 Purine metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta01240 Biosynthesis of cofactors 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106411539 106445623 103844343 816078 107928892 107943306 102612069 100803872 100807730 100258959 18097832 7457516 25482209 101246211 102579317 107789909 107823728 4330440 100382871 123128106 123137893 123402537 8073870 100843266
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