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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246713   polygalacturonase At1g48100-like 
 sly-r.6   101246713   polygalacturonase At1g48100-like 
 ath-u.5   AT5G14650   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G10640   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G60590   Pectin lyase-like superfamily protein 
 gma-u.5   547542   polygalacturonase PG1 
 gma-u.5   547543   polygalacturonase PG2 
 gma-u.5   732602   polygalacturonase At1g48100 
 vvi-u.5   100241353   polygalacturonase At1g48100 
 vvi-u.5   100233039   polygalacturonase 
 ppo-u.5   7492392   polygalacturonase At1g48100 
 mtr-u.5   11407103   polygalacturonase At1g48100 
 mtr-u.5   11423776   polygalacturonase At1g48100 
 mtr-u.5   25501370   polygalacturonase At1g48100 
 osa-u.5   4339708   polygalacturonase At1g48100 
 osa-u.5   4326573   polygalacturonase At1g48100 
 zma-u.5   100282388   polygalacturonase 
 zma-u.5   100284545   polygalacturonase 
 zma-u.5   100273736   uncharacterized LOC100273736 

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Top 50 coexpressed genes to 101246713 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246713 (sly-u.5 coexpression data)

CoexMap"101246713"


slyLOC101246713 | Entrez gene ID : 101246713      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 3 2 1 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (703 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (56 genes)  IEA  
Protein XP_004238649.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_004238649.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_004238649.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246713

.
sly-r.6
for
101246713

.
ath-u.5
for
AT5G14650

.
ath-u.5
for
AT1G10640

.
ath-u.5
for
AT1G60590

.
gma-u.5
for
547542

.
gma-u.5
for
547543

.
gma-u.5
for
732602

.
vvi-u.5
for
100241353

.
vvi-u.5
for
100233039

.
ppo-u.5
for
7492392

.
mtr-u.5
for
11407103

.
mtr-u.5
for
11423776

.
mtr-u.5
for
25501370

.
osa-u.5
for
4339708

.
osa-u.5
for
4326573

.
zma-u.5
for
100282388

.
zma-u.5
for
100284545

.
zma-u.5
for
100273736

.


Ortholog ID: 2237
Species ath ath gma gma sly osa zma zma bra bra vvi vvi ppo mtr mtr tae hvu hvu ghi ghi bna sbi sbi cit bdi
Symbol AT5G14650 AT1G60590 LOC732602 LOC100783813 LOC101246713 LOC4326573 LOC100282388 LOC100273736 LOC103838503 LOC103846471 LOC100233039 LOC100241353 LOC7492392 LOC11423776 LOC25501370 LOC123061559 LOC123451668 LOC123443940 LOC107898665 LOC107909678 LOC106359419 LOC8054932 LOC8064720 LOC102609721 LOC100821108
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase uncharacterized LOC100273736 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
sbi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831317 842353 732602 100783813 101246713 4326573 100282388 100273736 103838503 103846471 100233039 100241353 7492392 11423776 25501370 123061559 123451668 123443940 107898665 107909678 106359419 8054932 8064720 102609721 100821108
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