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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246742   nuclear transcription factor Y subunit A-8 
 sly-r.6   101246742   nuclear transcription factor Y subunit A-8 
 sly-m.5   101246742   nuclear transcription factor Y subunit A-8 
 sly-u.5   101259926   nuclear transcription factor Y subunit A-4 
 sly-u.5   101247294   nuclear transcription factor Y subunit A-7-like 
 ath-u.5   NF-YA8   nuclear factor Y, subunit A8 
 ath-u.5   NF-YA3   nuclear factor Y, subunit A3 
 gma-u.5   NF-YA12   nuclear transcription factor Y subunit A-12 
 gma-u.5   NF-YA19   nuclear transcription factor Y subunit A-19 
 gma-u.5   NF-YA15   nuclear transcription factor Y subunit A-15 
 vvi-u.5   100249800   nuclear transcription factor Y subunit A-3 
 vvi-u.5   100249054   nuclear transcription factor Y subunit A-4 
 ppo-u.5   7490523   nuclear transcription factor Y subunit A-3 
 ppo-u.5   7484645   nuclear transcription factor Y subunit A-4 
 mtr-u.5   11433420   nuclear transcription factor Y subunit A-8 
 osa-u.5   4331796   nuclear transcription factor Y subunit A-7 
 osa-u.5   9270863   nuclear transcription factor Y subunit A-4 
 osa-u.5   4333094   nuclear transcription factor Y subunit A-4 
 zma-u.5   103644713   nuclear transcription factor Y subunit A-7 
 zma-u.5   100280919   nuclear transcription factor Y subunit A-3 
 zma-u.5   100194182   nuclear transcription factor Y subunit A-3 

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Top 50 coexpressed genes to 101246742 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246742 (sly-u.5 coexpression data)

CoexMap"101246742"


slyLOC101246742 | Entrez gene ID : 101246742      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 2 2 1 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (493 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (30 genes)  IEA  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (326 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein XP_004245059.1 [sequence] [blastp]
XP_069144139.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for XP_004245059.1)
nucl 9,  chlo 1,  cyto 1  (predict for XP_069144139.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_004245059.1)
other 4,  chlo 3  (predict for XP_069144139.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246742

.
sly-r.6
for
101246742

.
sly-m.5
for
101246742

.
sly-u.5
for
101259926

.
sly-u.5
for
101247294

.
ath-u.5
for
NF-YA8

.
ath-u.5
for
NF-YA3

.
gma-u.5
for
NF-YA12

.
gma-u.5
for
NF-YA19

.
gma-u.5
for
NF-YA15

.
vvi-u.5
for
100249800

.
vvi-u.5
for
100249054

.
ppo-u.5
for
7490523

.
ppo-u.5
for
7484645

.
mtr-u.5
for
11433420

.
osa-u.5
for
4331796

.
osa-u.5
for
9270863

.
osa-u.5
for
4333094

.
zma-u.5
for
103644713

.
zma-u.5
for
100280919

.
zma-u.5
for
100194182

.


Ortholog ID: 1722
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol NF-YA3 NF-YA8 NF-YA09 NF-YA05 LOC101246742 LOC101247294 LOC4331796 LOC4333094 LOC103644713 LOC100282696 LOC103852805 LOC103842742 LOC100249800 LOC100249054 LOC7490523 LOC7484645 LOC11433420 LOC123187984 LOC123128600 LOC123425358 LOC123403683 LOC107929866 LOC107902490 LOC106402883 LOC106354243 LOC8081931 LOC8080415 LOC102595015 LOC102578385 LOC102611325 LOC100846922 LOC100832222 LOC107789322 LOC107772175
Function* nuclear factor Y, subunit A3 nuclear factor Y, subunit A8 nuclear transcription factor Y subunit A-9 nuclear transcription factor Y subunit A-5 nuclear transcription factor Y subunit A-8 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-8 nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-8 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-5 nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-3-like nuclear transcription factor Y subunit A-5 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-3-like nuclear transcription factor Y subunit A-3 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 3
gma00760 Nicotinate and nicotinamide metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04070 Phosphatidylinositol signaling system 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00511 Other glycan degradation 3
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843614 838335 100793856 100500765 101246742 101247294 4331796 4333094 103644713 100282696 103852805 103842742 100249800 100249054 7490523 7484645 11433420 123187984 123128600 123425358 123403683 107929866 107902490 106402883 106354243 8081931 8080415 102595015 102578385 102611325 100846922 100832222 107789322 107772175
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