ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101246988	large ribosomal subunit protein uL24z
sly-r.6	101246988	large ribosomal subunit protein uL24z
sly-u.5	101267290	large ribosomal subunit protein uL24z
sly-u.5	101261182	large ribosomal subunit protein uL24z
ath-u.5	AT3G49910	Translation protein SH3-like family protein
ath-u.5	AT5G67510	Translation protein SH3-like family protein
gma-u.5	100775705	60S ribosomal protein L26-1
gma-u.5	100818263	60S ribosomal protein L26-1
gma-u.5	100788996	putative 60S ribosomal protein L26
vvi-u.5	100242242	large ribosomal subunit protein uL24z
vvi-u.5	100267018	60S ribosomal protein L26-1-like
ppo-u.5	7456938	60S ribosomal protein L26-1
ppo-u.5	18101102	60S ribosomal protein L26-1
ppo-u.5	7486328	60S ribosomal protein L26-1
mtr-u.5	11425151	60S ribosomal protein L26-2
mtr-u.5	11425352	60S ribosomal protein L26-1
mtr-u.5	11436692	60S ribosomal protein L26-1
osa-u.5	4351513	large ribosomal subunit protein uL24z
osa-u.5	4349791	large ribosomal subunit protein uL24z
osa-u.5	4325478	large ribosomal subunit protein uL24z
zma-u.5	100285268	60S ribosomal protein L26-1
zma-u.5	542610	60S ribosomal protein L26-1

Annotation

functional annotation

KEGG

sly03010 [list] [network] Ribosome (6225 genes)

GO BP

GO:0002181 [list] [network] cytoplasmic translation	(74 genes)	IEA
GO:0042273 [list] [network] ribosomal large subunit biogenesis	(92 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(140 genes)	IEA
GO:0005840 [list] [network] ribosome	(354 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(342 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1208 genes)	IEA

Protein

XP_004233458.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, mito 3, nucl 1, cyto_mito 1, mito_plas 1

(predict for XP_004233458.1)

Subcellular
localization
TargetP

mito 8, chlo 5

(predict for XP_004233458.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101246988	sly-r.6 for 101246988	sly-u.5 for 101267290	sly-u.5 for 101261182	ath-u.5 for AT3G49910	ath-u.5 for AT5G67510	gma-u.5 for 100775705	gma-u.5 for 100818263	gma-u.5 for 100788996	vvi-u.5 for 100242242	vvi-u.5 for 100267018	ppo-u.5 for 7456938	ppo-u.5 for 18101102	ppo-u.5 for 7486328	mtr-u.5 for 11425151	mtr-u.5 for 11425352	mtr-u.5 for 11436692	osa-u.5 for 4351513	osa-u.5 for 4349791	osa-u.5 for 4325478	zma-u.5 for 100285268	zma-u.5 for 542610

Ortholog

Ortholog ID: 2654

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

large ribosomal subunit protein uL24z

large ribosomal subunit protein uL24z-like

Translation protein SH3-like family protein

putative 60S ribosomal protein L26

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-2

60S ribosomal protein L26-1

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

ribosomal protein L26

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	15
tae00750	Vitamin B6 metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	21

Expression

Expression pattern

Entrez Gene ID^*

101246988

101267290

102588872

102596561

107831809

107826309

836887

824153

100788996

100775705

103827745

103840913

100267018

100242242

18101102

7486328

11425352

11425151

107924753

106451222

106390881

102621144

4351513

4349791

100285268

542610

123077703

123060594

123443110

8073332

100826639

5715546

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101246988 (sly-u.5 coexpression data)

Top 50 enrichment test to 101246988 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	3	2	3	3	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101246988 (sly-u.5 coexpression data)

Top 50 enrichment test to 101246988 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**