ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101247975	uncharacterized LOC101247975
sly-r.6	101247975	uncharacterized LOC101247975
ath-u.5	AT5G38840	SMAD/FHA domain-containing protein
gma-u.5	100794168	kanadaptin
gma-u.5	100778453	kanadaptin
vvi-u.5	100261709	uncharacterized LOC100261709
ppo-u.5	18097653	uncharacterized LOC18097653
mtr-u.5	11430739	kanadaptin
osa-u.5	4340752	uncharacterized LOC4340752
zma-u.5	103638266	kanadaptin

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003729 [list] [network] mRNA binding	(315 genes)	IEA
GO:0005515 [list] [network] protein binding	(3982 genes)	IEA

Protein

XP_004232125.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1, plas 1, cyto_plas 1

(predict for XP_004232125.1)

Subcellular
localization
TargetP

chlo 7, other 4

(predict for XP_004232125.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101247975	sly-r.6 for 101247975	ath-u.5 for AT5G38840	gma-u.5 for 100794168	gma-u.5 for 100778453	vvi-u.5 for 100261709	ppo-u.5 for 18097653	mtr-u.5 for 11430739	osa-u.5 for 4340752	zma-u.5 for 103638266

Ortholog ID: 10341

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101247975

kanadaptin

uncharacterized LOC107770402

uncharacterized LOC107771829

SMAD/FHA domain-containing protein

kanadaptin

uncharacterized LOC100261709

uncharacterized LOC18097653

kanadaptin

uncharacterized LOC102622167

uncharacterized LOC4340752

kanadaptin

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	4
sly03040	Spliceosome	2
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	3
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00514	Other types of O-glycan biosynthesis	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03420	Nucleotide excision repair	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03420	Nucleotide excision repair	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	9
tae03040	Spliceosome	7
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2
cre03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

101247975

102595926

107770402

107771829

833875

100794168

100778453

103863806

100261709

18097653

11430739

107952821

107954884

106411062

106445931

102622167

4340752

103638266

123150129

123164007

123407563

8073726

100833138

5723123

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101247975 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247975 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101247975 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247975 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**