ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102622167	uncharacterized LOC102622167
ath-u.5	AT5G38840	SMAD/FHA domain-containing protein
bra-r.6	103863806	kanadaptin
ghi-r.1	107954884	kanadaptin
ghi-r.1	107952821	kanadaptin
bna-r.1	106411062	kanadaptin
bna-r.1	106445931	kanadaptin
gma-u.5	100794168	kanadaptin
gma-u.5	100778453	kanadaptin
vvi-u.5	100261709	uncharacterized LOC100261709
ppo-u.5	18097653	uncharacterized LOC18097653
mtr-u.5	11430739	kanadaptin
sly-u.5	101247975	uncharacterized LOC101247975
sot-r.1	102595926	kanadaptin
nta-r.1	107771829	uncharacterized LOC107771829
nta-r.1	107770402	uncharacterized LOC107770402
osa-u.5	4340752	uncharacterized LOC4340752
zma-u.5	103638266	kanadaptin
tae-r.2	123164007	kanadaptin
tae-r.2	123156666	kanadaptin
tae-r.2	123150129	kanadaptin
hvu-r.1	123407563	kanadaptin
sbi-r.1	8073726	kanadaptin
bdi-r.1	100833138	kanadaptin
cre-r.1	CHLRE_03g152450v5	uncharacterized protein

Annotation

functional annotation

Function

uncharacterized LOC102622167

KEGG

GO BP

GO CC

GO MF

GO:0003729 [list] [network] mRNA binding	(227 genes)	IEA
GO:0005515 [list] [network] protein binding	(3939 genes)	IEA

Protein

XP_006482457.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1

(predict for XP_006482457.1)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for XP_006482457.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102622167	ath-u.5 for AT5G38840	bra-r.6 for 103863806	ghi-r.1 for 107954884	ghi-r.1 for 107952821	bna-r.1 for 106411062	bna-r.1 for 106445931	gma-u.5 for 100794168	gma-u.5 for 100778453	vvi-u.5 for 100261709	ppo-u.5 for 18097653	mtr-u.5 for 11430739	sly-u.5 for 101247975	sot-r.1 for 102595926	nta-r.1 for 107771829	nta-r.1 for 107770402	osa-u.5 for 4340752	zma-u.5 for 103638266	tae-r.2 for 123164007	tae-r.2 for 123156666	tae-r.2 for 123150129	hvu-r.1 for 123407563	sbi-r.1 for 8073726	bdi-r.1 for 100833138	cre-r.1 for CHLRE_03g152450v5

Please wait a moment.

Ortholog

Ortholog ID: 10341

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC102622167

SMAD/FHA domain-containing protein

kanadaptin

uncharacterized LOC100261709

uncharacterized LOC18097653

kanadaptin

uncharacterized LOC101247975

kanadaptin

uncharacterized LOC107771829

uncharacterized LOC107770402

uncharacterized LOC4340752

kanadaptin

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03420	Nucleotide excision repair	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03420	Nucleotide excision repair	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00514	Other types of O-glycan biosynthesis	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	4
sly03040	Spliceosome	2
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	3
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	9
tae03040	Spliceosome	7
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	7
tae03040	Spliceosome	4
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2
cre03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

102622167

833875

103863806

107954884

107952821

106411062

106445931

100794168

100778453

100261709

18097653

11430739

101247975

102595926

107771829

107770402

4340752

103638266

123164007

123156666

123150129

123407563

8073726

100833138

5723123

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102622167 (cit-r.1 coexpression data)

Top 50 enrichment test to 102622167 (cit-r.1 coexpression data)


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	2	2	2	1	1	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102622167 (cit-r.1 coexpression data)

Top 50 enrichment test to 102622167 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**