ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101248365	ACD11 homolog protein
sly-r.6	101248365	ACD11 homolog protein
sly-u.5	101254054	accelerated cell death 11
sot-r.1	102591244	accelerated cell death 11
sot-r.1	102601335	accelerated cell death 11-like
nta-r.1	107763219	accelerated cell death 11-like
ath-u.5	ACD11	Glycolipid transfer protein (GLTP) family protein
ath-u.5	AT4G39670	Glycolipid transfer protein (GLTP) family protein
gma-u.5	100813626	glycolipid transfer protein domain-containing protein 1-like
gma-u.5	100818548	putative glycolipid transfer protein
gma-u.5	100305964	uncharacterized LOC100305964
bra-r.6	103831268	ACD11 homolog protein
bra-r.6	103857543	accelerated cell death 11
vvi-u.5	100258392	accelerated cell death 11
vvi-u.5	109121426	accelerated cell death 11
ppo-u.5	7483948	ACD11 homolog protein
ppo-u.5	7496138	accelerated cell death 11
ppo-u.5	7468980	accelerated cell death 11
mtr-u.5	11408222	accelerated cell death 11
mtr-u.5	25485512	ACD11 homolog protein
mtr-u.5	25486298	accelerated cell death 11
ghi-r.1	107910096	ACD11 homolog protein
ghi-r.1	107918971	ACD11 homolog protein
ghi-r.1	107928486	accelerated cell death 11
bna-r.1	125588649	uncharacterized LOC125588649
bna-r.1	106404757	ACD11 homolog protein-like
cit-r.1	102627997	accelerated cell death 11
cit-r.1	102609413	ACD11 homolog protein
osa-u.5	4346286	accelerated cell death 11
osa-u.5	4334340	accelerated cell death 11
osa-u.5	4333879	ACD11 homolog protein
zma-u.5	100273327	putative glycolipid transfer protein (GLTP) family protein
zma-u.5	100278613	uncharacterized LOC100278613
zma-u.5	100275982	uncharacterized LOC100275982
tae-r.2	123123099	accelerated cell death 11
tae-r.2	123094338	ACD11 homolog protein
tae-r.2	123099476	ACD11 homolog protein
hvu-r.1	123452564	accelerated cell death 11
hvu-r.1	123451047	ACD11 homolog protein
sbi-r.1	8083921	accelerated cell death 11
sbi-r.1	8063396	ACD11 homolog protein
bdi-r.1	100833835	ACD11 homolog protein
bdi-r.1	100836492	accelerated cell death 11
cre-r.1	CHLRE_03g144204v5	uncharacterized protein

Top 50 coexpressed genes to 101248365 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101248365 (sly-u.5 coexpression data)

CoexMap"101248365"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0035627 [list] [network] ceramide transport	(5 genes)	IEA
GO:0120009 [list] [network] intermembrane lipid transfer	(5 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol	(916 genes)	IEA
GO:0016020 [list] [network] membrane	(3085 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5127 genes)	IEA

GO MF

GO:1902387 [list] [network] ceramide 1-phosphate binding	(5 genes)	IEA
GO:1902388 [list] [network] ceramide 1-phosphate transfer activity	(5 genes)	IEA

Protein

XP_004252208.1 [sequence] [blastp]
XP_019066993.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, plas 2, cyto_pero 2, cyto_E.R. 2	(predict for XP_004252208.1)
cyto 4, plas 2, cyto_pero 2, cyto_E.R. 2	(predict for XP_019066993.1)

Subcellular
localization
TargetP

other 9	(predict for XP_004252208.1)
other 9	(predict for XP_019066993.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101248365	sly-r.6 for 101248365	sly-u.5 for 101254054	sot-r.1 for 102591244	sot-r.1 for 102601335	nta-r.1 for 107763219	ath-u.5 for ACD11	ath-u.5 for AT4G39670	gma-u.5 for 100813626	gma-u.5 for 100818548	gma-u.5 for 100305964	bra-r.6 for 103831268	bra-r.6 for 103857543	vvi-u.5 for 100258392	vvi-u.5 for 109121426	ppo-u.5 for 7483948	ppo-u.5 for 7496138	ppo-u.5 for 7468980	mtr-u.5 for 11408222	mtr-u.5 for 25485512	mtr-u.5 for 25486298	ghi-r.1 for 107910096	ghi-r.1 for 107918971	ghi-r.1 for 107928486	bna-r.1 for 125588649	bna-r.1 for 106404757	cit-r.1 for 102627997	cit-r.1 for 102609413	osa-u.5 for 4346286	osa-u.5 for 4334340	osa-u.5 for 4333879	zma-u.5 for 100273327	zma-u.5 for 100278613	zma-u.5 for 100275982	tae-r.2 for 123123099	tae-r.2 for 123094338	tae-r.2 for 123099476	hvu-r.1 for 123452564	hvu-r.1 for 123451047	sbi-r.1 for 8083921	sbi-r.1 for 8063396	bdi-r.1 for 100833835	bdi-r.1 for 100836492	cre-r.1 for CHLRE_03g144204v5

Ortholog

Ortholog ID: 1653

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ACD11

Function^*

ACD11 homolog protein

accelerated cell death 11

accelerated cell death 11-like

Glycolipid transfer protein (GLTP) family protein

glycolipid transfer protein domain-containing protein 1-like

uncharacterized LOC100305964

GLTP domain-containing protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

putative glycolipid transfer protein (GLTP) family protein

uncharacterized LOC100278613

uncharacterized LOC100275982

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta04148	Efferocytosis	4
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04145	Phagosome	2
bra04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	13
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00062	Fatty acid elongation	6
ghi04626	Plant-pathogen interaction	6
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00280	Valine, leucine and isoleucine degradation	5
bna01200	Carbon metabolism	5
bna00250	Alanine, aspartate and glutamate metabolism	4
bna00260	Glycine, serine and threonine metabolism	4
bna00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3
cit04016	MAPK signaling pathway - plant	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04626	Plant-pathogen interaction	3
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03250	Viral life cycle - HIV-1	3
bdi04144	Endocytosis	2
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

101248365

101254054

102591244

102601335

107763219

818034

830121

100813626

100305964

100499750

103857543

100258392

100259901

7483948

7496138

7468980

11408222

25485512

25486298

107918971

107908436

107887172

106361359

106402341

102627997

102609413

4346286

4334340

4333879

100273327

100278613

100275982

123094338

123099476

123105305

123452564

123451047

8083921

8063396

100833835

100836492

5721314

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Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	2	3	2	2	3	3	3	2	2	3	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101248365 (sly-u.5 coexpression data)

Top 50 enrichment test to 101248365 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**