ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123451047	ACD11 homolog protein
hvu-r.1	123452564	accelerated cell death 11
tae-r.2	123099476	ACD11 homolog protein
tae-r.2	123082365	ACD11 homolog protein
tae-r.2	123094338	ACD11 homolog protein
bdi-r.1	100836492	accelerated cell death 11
bdi-r.1	100833835	ACD11 homolog protein
osa-u.5	4346286	accelerated cell death 11
osa-u.5	4334340	accelerated cell death 11
osa-u.5	4333879	ACD11 homolog protein
zma-u.5	100275982	uncharacterized LOC100275982
zma-u.5	100278613	uncharacterized LOC100278613
zma-u.5	100273327	putative glycolipid transfer protein (GLTP) family protein
sbi-r.1	8063396	ACD11 homolog protein
sbi-r.1	8083921	accelerated cell death 11
ath-u.5	ACD11	Glycolipid transfer protein (GLTP) family protein
ath-u.5	AT4G39670	Glycolipid transfer protein (GLTP) family protein
gma-u.5	100818548	putative glycolipid transfer protein
gma-u.5	100813626	glycolipid transfer protein domain-containing protein 1-like
gma-u.5	100499750	GLTP domain-containing protein
sly-u.5	101254054	accelerated cell death 11
sly-u.5	101248365	ACD11 homolog protein
bra-r.6	103831268	ACD11 homolog protein
bra-r.6	103835108	alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
vvi-u.5	109121426	accelerated cell death 11
vvi-u.5	100266751	accelerated cell death 11
ppo-u.5	7468980	accelerated cell death 11
ppo-u.5	7483948	ACD11 homolog protein
ppo-u.5	7496138	accelerated cell death 11
mtr-u.5	25485512	ACD11 homolog protein
mtr-u.5	11408222	accelerated cell death 11
mtr-u.5	25486298	accelerated cell death 11
ghi-r.1	107908436	accelerated cell death 11
ghi-r.1	107910096	ACD11 homolog protein
ghi-r.1	107918971	ACD11 homolog protein
bna-r.1	106409686	accelerated cell death 11-like
bna-r.1	125588649	uncharacterized LOC125588649
sot-r.1	102591244	accelerated cell death 11
sot-r.1	102601335	accelerated cell death 11-like
cit-r.1	102627997	accelerated cell death 11
cit-r.1	102609413	ACD11 homolog protein
nta-r.1	107763219	accelerated cell death 11-like
cre-r.1	CHLRE_03g144204v5	uncharacterized protein

Top 50 coexpressed genes to 123451047 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123451047 (hvu-r.1 coexpression data)

CoexMap"123451047"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0035627 [list] [network] ceramide transport	(5 genes)	IEA
GO:0120009 [list] [network] intermembrane lipid transfer	(5 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol	(938 genes)	IEA
GO:0016020 [list] [network] membrane	(3800 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5514 genes)	IEA

GO MF

GO:1902387 [list] [network] ceramide 1-phosphate binding	(5 genes)	IEA
GO:1902388 [list] [network] ceramide 1-phosphate transfer activity	(5 genes)	IEA

Protein

XP_044983996.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, cyto 1

(predict for XP_044983996.1)

Subcellular
localization
TargetP

mito 7, other 3

(predict for XP_044983996.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123451047	hvu-r.1 for 123452564	tae-r.2 for 123099476	tae-r.2 for 123082365	tae-r.2 for 123094338	bdi-r.1 for 100836492	bdi-r.1 for 100833835	osa-u.5 for 4346286	osa-u.5 for 4334340	osa-u.5 for 4333879	zma-u.5 for 100275982	zma-u.5 for 100278613	zma-u.5 for 100273327	sbi-r.1 for 8063396	sbi-r.1 for 8083921	ath-u.5 for ACD11	ath-u.5 for AT4G39670	gma-u.5 for 100818548	gma-u.5 for 100813626	gma-u.5 for 100499750	sly-u.5 for 101254054	sly-u.5 for 101248365	bra-r.6 for 103831268	bra-r.6 for 103835108	vvi-u.5 for 109121426	vvi-u.5 for 100266751	ppo-u.5 for 7468980	ppo-u.5 for 7483948	ppo-u.5 for 7496138	mtr-u.5 for 25485512	mtr-u.5 for 11408222	mtr-u.5 for 25486298	ghi-r.1 for 107908436	ghi-r.1 for 107910096	ghi-r.1 for 107918971	bna-r.1 for 106409686	bna-r.1 for 125588649	sot-r.1 for 102591244	sot-r.1 for 102601335	cit-r.1 for 102627997	cit-r.1 for 102609413	nta-r.1 for 107763219	cre-r.1 for CHLRE_03g144204v5

Ortholog

Ortholog ID: 1653

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

ACD11

Function^*

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

uncharacterized LOC100275982

uncharacterized LOC100278613

putative glycolipid transfer protein (GLTP) family protein

ACD11 homolog protein

accelerated cell death 11

Glycolipid transfer protein (GLTP) family protein

glycolipid transfer protein domain-containing protein 1-like

GLTP domain-containing protein

uncharacterized LOC100305964

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial

accelerated cell death 11

accelerated cell death 11-like

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03250	Viral life cycle - HIV-1	3
bdi04144	Endocytosis	2
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04626	Plant-pathogen interaction	3
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04145	Phagosome	2
bra04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	13
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00062	Fatty acid elongation	6
ghi04626	Plant-pathogen interaction	6
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00280	Valine, leucine and isoleucine degradation	5
bna01200	Carbon metabolism	5
bna00250	Alanine, aspartate and glutamate metabolism	4
bna00260	Glycine, serine and threonine metabolism	4
bna00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3
cit04016	MAPK signaling pathway - plant	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta04148	Efferocytosis	4
nta03050	Proteasome	2

Expression

Expression pattern

Entrez Gene ID^*

123451047

123452564

123099476

123094338

123105305

100836492

100833835

4346286

4334340

4333879

100275982

100278613

100273327

8063396

8083921

818034

830121

100813626

100499750

100305964

101254054

101248365

103857543

100259901

100258392

7468980

7483948

7496138

25485512

11408222

25486298

107908436

107918971

107887172

106402341

106361359

102591244

102601335

102627997

102609413

107763219

5721314

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Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	3	3	2	2	3	2	2	2	3	3	3	2	2	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123451047 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123451047 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**