ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107908436	accelerated cell death 11
ghi-r.1	107910096	ACD11 homolog protein
ghi-r.1	107918971	ACD11 homolog protein
ghi-r.1	107928486	accelerated cell death 11
ath-u.5	ACD11	Glycolipid transfer protein (GLTP) family protein
ath-u.5	AT4G39670	Glycolipid transfer protein (GLTP) family protein
bra-r.6	103857543	accelerated cell death 11
bra-r.6	103835108	alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
bna-r.1	106409686	accelerated cell death 11-like
bna-r.1	125588649	uncharacterized LOC125588649
bna-r.1	106402341	accelerated cell death 11
cit-r.1	102609413	ACD11 homolog protein
cit-r.1	102627997	accelerated cell death 11
gma-u.5	100305964	uncharacterized LOC100305964
gma-u.5	100499750	GLTP domain-containing protein
gma-u.5	100813626	glycolipid transfer protein domain-containing protein 1-like
vvi-u.5	100266751	accelerated cell death 11
vvi-u.5	109121426	accelerated cell death 11
vvi-u.5	100259901	accelerated cell death 11
ppo-u.5	7483948	ACD11 homolog protein
ppo-u.5	7468980	accelerated cell death 11
ppo-u.5	7496138	accelerated cell death 11
mtr-u.5	25486298	accelerated cell death 11
mtr-u.5	25485512	ACD11 homolog protein
mtr-u.5	11408222	accelerated cell death 11
sly-u.5	101248365	ACD11 homolog protein
sly-u.5	101254054	accelerated cell death 11
sot-r.1	102591244	accelerated cell death 11
sot-r.1	102601335	accelerated cell death 11-like
nta-r.1	107763219	accelerated cell death 11-like
osa-u.5	4334340	accelerated cell death 11
osa-u.5	4346286	accelerated cell death 11
osa-u.5	4333879	ACD11 homolog protein
zma-u.5	100273327	putative glycolipid transfer protein (GLTP) family protein
zma-u.5	100275982	uncharacterized LOC100275982
zma-u.5	100278613	uncharacterized LOC100278613
tae-r.2	123123099	accelerated cell death 11
tae-r.2	123094338	ACD11 homolog protein
tae-r.2	123099476	ACD11 homolog protein
hvu-r.1	123452564	accelerated cell death 11
hvu-r.1	123451047	ACD11 homolog protein
sbi-r.1	8083921	accelerated cell death 11
sbi-r.1	8063396	ACD11 homolog protein
bdi-r.1	100836492	accelerated cell death 11
bdi-r.1	100833835	ACD11 homolog protein
cre-r.1	CHLRE_03g144204v5	uncharacterized protein

Top 50 coexpressed genes to 107908436 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107908436 (ghi-r.1 coexpression data)

CoexMap"107908436"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0120009 [list] [network] intermembrane lipid transfer

(14 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13864 genes)

IEA

GO MF

GO:0120013 [list] [network] lipid transfer activity

(32 genes)

IEA

Protein

XP_040944184.1 [sequence] [blastp]
XP_040944185.1 [sequence] [blastp]
XP_040944186.1 [sequence] [blastp]
XP_040944187.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, mito 1, cyto 1, extr 1, cysk 1, cyto_mito 1, mito_plas 1	(predict for XP_040944184.1)
nucl 3, vacu 2, chlo 1, nucl_plas 1, E.R._vacu 1	(predict for XP_040944185.1)
nucl 3, vacu 2, chlo 1, nucl_plas 1, E.R._vacu 1	(predict for XP_040944186.1)
nucl 3, vacu 2, chlo 1, nucl_plas 1, E.R._vacu 1	(predict for XP_040944187.1)

Subcellular
localization
TargetP

other 8	(predict for XP_040944184.1)
other 4	(predict for XP_040944185.1)
other 4	(predict for XP_040944186.1)
other 4	(predict for XP_040944187.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107908436	ghi-r.1 for 107910096	ghi-r.1 for 107918971	ghi-r.1 for 107928486	ath-u.5 for ACD11	ath-u.5 for AT4G39670	bra-r.6 for 103857543	bra-r.6 for 103835108	bna-r.1 for 106409686	bna-r.1 for 125588649	bna-r.1 for 106402341	cit-r.1 for 102609413	cit-r.1 for 102627997	gma-u.5 for 100305964	gma-u.5 for 100499750	gma-u.5 for 100813626	vvi-u.5 for 100266751	vvi-u.5 for 109121426	vvi-u.5 for 100259901	ppo-u.5 for 7483948	ppo-u.5 for 7468980	ppo-u.5 for 7496138	mtr-u.5 for 25486298	mtr-u.5 for 25485512	mtr-u.5 for 11408222	sly-u.5 for 101248365	sly-u.5 for 101254054	sot-r.1 for 102591244	sot-r.1 for 102601335	nta-r.1 for 107763219	osa-u.5 for 4334340	osa-u.5 for 4346286	osa-u.5 for 4333879	zma-u.5 for 100273327	zma-u.5 for 100275982	zma-u.5 for 100278613	tae-r.2 for 123123099	tae-r.2 for 123094338	tae-r.2 for 123099476	hvu-r.1 for 123452564	hvu-r.1 for 123451047	sbi-r.1 for 8083921	sbi-r.1 for 8063396	bdi-r.1 for 100836492	bdi-r.1 for 100833835	cre-r.1 for CHLRE_03g144204v5

Ortholog

Ortholog ID: 1653

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ACD11

Function^*

accelerated cell death 11

ACD11 homolog protein

Glycolipid transfer protein (GLTP) family protein

accelerated cell death 11

alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial

ACD11 homolog protein

accelerated cell death 11

uncharacterized LOC100305964

GLTP domain-containing protein

glycolipid transfer protein domain-containing protein 1-like

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

accelerated cell death 11-like

accelerated cell death 11

ACD11 homolog protein

putative glycolipid transfer protein (GLTP) family protein

uncharacterized LOC100275982

uncharacterized LOC100278613

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

accelerated cell death 11

ACD11 homolog protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00062	Fatty acid elongation	6
ghi04626	Plant-pathogen interaction	6
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04145	Phagosome	2
bra04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00280	Valine, leucine and isoleucine degradation	5
bna01200	Carbon metabolism	5
bna00250	Alanine, aspartate and glutamate metabolism	4
bna00260	Glycine, serine and threonine metabolism	4
bna00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3
cit04016	MAPK signaling pathway - plant	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	13
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta04148	Efferocytosis	4
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04626	Plant-pathogen interaction	3
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03250	Viral life cycle - HIV-1	3
bdi04144	Endocytosis	2
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

107908436

107918971

107887172

818034

830121

103857543

106402341

106361359

102609413

102627997

100305964

100499750

100813626

100259901

100258392

7483948

7468980

7496138

25486298

25485512

11408222

101248365

101254054

102591244

102601335

107763219

4334340

4346286

4333879

100273327

100275982

100278613

123094338

123099476

123105305

123452564

123451047

8083921

8063396

100836492

100833835

5721314

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	3	2	3	3	3	3	2	2	1	3	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107908436 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107908436 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**