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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248886   RNA-binding protein 8A-like 
 sly-r.6   101248886   RNA-binding protein 8A-like 
 sly-m.5   101248886   RNA-binding protein 8A-like 
 sot-r.1   102597437   RNA-binding protein 8A-like 
 sot-r.1   102577678   uncharacterized LOC102577678 
 nta-r.1   107830894   RNA-binding protein Y14A 
 nta-r.1   107793685   RNA-binding protein Y14A-like 
 nta-r.1   107793126   RNA-binding protein Y14A-like 
 ath-u.5   Y14   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100778595   RNA-binding protein Y14 
 gma-u.5   100527187   uncharacterized LOC100527187 
 bra-r.6   103868564   RNA-binding protein Y14 
 bra-r.6   103871282   RNA-binding protein Y14 
 bra-r.6   103832839   RNA-binding protein Y14 
 vvi-u.5   100260882   RNA-binding protein Y14 
 ppo-u.5   7467973   RNA-binding protein Y14 
 ppo-u.5   7467378   RNA-binding protein Y14 
 mtr-u.5   11427477   RNA-binding protein Y14A 
 ghi-r.1   107889297   RNA-binding protein Y14 
 ghi-r.1   107891439   RNA-binding protein Y14 
 ghi-r.1   107959274   RNA-binding protein Y14 
 bna-r.1   106451650   RNA-binding protein Y14-like 
 bna-r.1   125609516   RNA-binding protein Y14-like 
 bna-r.1   106430605   RNA-binding protein Y14 
 cit-r.1   102615670   RNA-binding protein Y14 
 osa-u.5   4337757   RNA-binding protein Y14A-like 
 zma-u.5   100280761   RNA-binding protein 8A 
 zma-u.5   100283928   uncharacterized LOC100283928 
 tae-r.2   123111024   RNA-binding protein Y14A 
 tae-r.2   123180367   RNA-binding protein Y14A 
 tae-r.2   780666   RNA-binding protein Y14A 
 hvu-r.1   123424277   RNA-binding protein Y14A 
 sbi-r.1   8069545   RNA-binding protein 8A 
 sbi-r.1   8071298   uncharacterized RNA-binding protein C23A1.09 
 bdi-r.1   100837258   RNA-binding protein Y14A 
 bdi-r.1   100846603   RNA-binding protein Y14A 
 cre-r.1   CHLRE_12g526750v5   uncharacterized protein 

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Top 50 coexpressed genes to 101248886 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248886 (sly-u.5 coexpression data)

CoexMap"101248886"


slyLOC101248886 | Entrez gene ID : 101248886      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 3 1 2 3 1 2 1 3 3 1 1 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03013 [list] [network] Nucleocytoplasmic transport (106 genes)
sly03015 [list] [network] mRNA surveillance pathway (129 genes)
sly03040 [list] [network] Spliceosome (385 genes)
GO BP
GO:0008380 [list] [network] RNA splicing  (188 genes)  IEA  
GO CC
GO:0035145 [list] [network] exon-exon junction complex  (7 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (315 genes)  IEA  
Protein NP_001278837.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001278837.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001278837.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248886
sly-r.6
for
101248886
sly-m.5
for
101248886
sot-r.1
for
102597437
sot-r.1
for
102577678
nta-r.1
for
107830894
nta-r.1
for
107793685
nta-r.1
for
107793126
ath-u.5
for
Y14
gma-u.5
for
100778595
gma-u.5
for
100527187
bra-r.6
for
103868564
bra-r.6
for
103871282
bra-r.6
for
103832839
vvi-u.5
for
100260882
ppo-u.5
for
7467973
ppo-u.5
for
7467378
mtr-u.5
for
11427477
ghi-r.1
for
107889297
ghi-r.1
for
107891439
ghi-r.1
for
107959274
bna-r.1
for
106451650
bna-r.1
for
125609516
bna-r.1
for
106430605
cit-r.1
for
102615670
osa-u.5
for
4337757
zma-u.5
for
100280761
zma-u.5
for
100283928
tae-r.2
for
123111024
tae-r.2
for
123180367
tae-r.2
for
780666
hvu-r.1
for
123424277
sbi-r.1
for
8069545
sbi-r.1
for
8071298
bdi-r.1
for
100837258
bdi-r.1
for
100846603
cre-r.1
for
CHLRE_12g526750v5


Ortholog ID: 4317
Species sly sot sot nta nta nta ath gma gma bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC101248886 LOC102597437 LOC102577678 LOC107830894 LOC107793685 LOC107832231 Y14 LOC100778595 LOC100527187 LOC103868564 LOC103871282 LOC103832839 LOC100260882 LOC7467973 LOC7467378 LOC11427477 LOC107902789 LOC107939456 LOC107945095 LOC125609516 LOC106346060 LOC106427430 LOC102615670 LOC4337757 LOC100280761 LOC100283928 LOC123111024 LOC123180367 LOC780666 LOC123424277 LOC8069545 LOC8071298 LOC100837258 LOC100846603 CHLRE_12g526750v5
Function* RNA-binding protein 8A-like RNA-binding protein 8A-like uncharacterized LOC102577678 RNA-binding protein Y14A RNA-binding protein Y14A-like RNA-binding protein Y14A RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein Y14 uncharacterized LOC100527187 RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14A RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14-like RNA-binding protein Y14-like RNA-binding protein Y14 RNA-binding protein Y14 RNA-binding protein Y14A-like RNA-binding protein 8A uncharacterized LOC100283928 RNA-binding protein Y14A RNA-binding protein Y14A RNA-binding protein Y14A RNA-binding protein Y14A RNA-binding protein 8A uncharacterized RNA-binding protein C23A1.09 RNA-binding protein Y14A RNA-binding protein Y14A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03040 Spliceosome 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03050 Proteasome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03010 Ribosome 2
nta03040 Spliceosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 5
ath03013 Nucleocytoplasmic transport 4
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma03013 Nucleocytoplasmic transport 6
gma03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03040 Spliceosome 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03013 Nucleocytoplasmic transport 5
bra03040 Spliceosome 5
bra03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra03082 ATP-dependent chromatin remodeling 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03040 Spliceosome 3
vvi03010 Ribosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03013 Nucleocytoplasmic transport 5
ppo03015 mRNA surveillance pathway 4
ppo03040 Spliceosome 4
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03015 mRNA surveillance pathway 5
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
osa03013 Nucleocytoplasmic transport 4
osa03015 mRNA surveillance pathway 3
osa03250 Viral life cycle - HIV-1 2
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03420 Nucleotide excision repair 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03420 Nucleotide excision repair 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 6
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04626 Plant-pathogen interaction 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 16
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101248886 102597437 102577678 107830894 107793685 107832231 841576 100778595 100527187 103868564 103871282 103832839 100260882 7467973 7467378 11427477 107902789 107939456 107945095 125609516 106346060 106427430 102615670 4337757 100280761 100283928 123111024 123180367 780666 123424277 8069545 8071298 100837258 100846603 5722477
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