Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249052   putative elongation factor TypA-like SVR3, chloroplastic 
 sly-r.6   101249052   putative elongation factor TypA-like SVR3, chloroplastic 
 ath-u.5   SVR3   elongation factor family protein 
 gma-u.5   100794574   putative elongation factor TypA-like SVR3, chloroplastic 
 gma-u.5   100785222   putative elongation factor TypA-like SVR3, chloroplastic 
 vvi-u.5   100264026   putative elongation factor TypA-like SVR3, chloroplastic 
 ppo-u.5   7473632   putative elongation factor TypA-like SVR3, chloroplastic 
 mtr-u.5   25483409   putative elongation factor TypA-like SVR3, chloroplastic 
 osa-u.5   4329037   putative elongation factor TypA-like SVR3, chloroplastic 
 zma-u.5   100857077   GTP-binding protein TypA 

close


Top 50 coexpressed genes to 101249052 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101249052 (sly-u.5 coexpression data)

CoexMap"101249052"


slyLOC101249052 | Entrez gene ID : 101249052      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (566 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (208 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (239 genes)  IEA  
Protein XP_004234769.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  E.R. 1  (predict for XP_004234769.2)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_004234769.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249052

.
sly-r.6
for
101249052

.
ath-u.5
for
SVR3

.
gma-u.5
for
100794574

.
gma-u.5
for
100785222

.
vvi-u.5
for
100264026

.
ppo-u.5
for
7473632

.
mtr-u.5
for
25483409

.
osa-u.5
for
4329037

.
zma-u.5
for
100857077

.


Ortholog ID: 9093
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol SVR3 LOC100785222 LOC100794574 LOC101249052 LOC4329037 LOC100857077 LOC103850889 LOC103846551 LOC100264026 LOC7473632 LOC25483409 LOC123144539 LOC123137137 LOC123401218 LOC107945364 LOC107939239 LOC125579044 LOC106372278 CHLRE_07g335200v5 LOC8081627 LOC102598186 LOC102622117 LOC100827491 LOC107814670 LOC107815102
Function* elongation factor family protein putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic GTP-binding protein TypA putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic uncharacterized protein putative elongation factor TypA-like SVR3, chloroplastic GTP-binding protein TypA/BipA homolog putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic putative elongation factor TypA-like SVR3, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
bra00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00230 Purine metabolism 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 3
cre01200 Carbon metabolism 3
cre01230 Biosynthesis of amino acids 3
cre00230 Purine metabolism 2
cre00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00230 Purine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831209 100785222 100794574 101249052 4329037 100857077 103850889 103846551 100264026 7473632 25483409 123144539 123137137 123401218 107945364 107939239 125579044 106372278 5725704 8081627 102598186 102622117 100827491 107814670 107815102
The preparation time of this page was 0.2 [sec].