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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249319   geranylfarnesyl diphosphate synthase, chloroplastic-like 
 sly-r.6   101249319   geranylfarnesyl diphosphate synthase, chloroplastic-like 
 sly-u.5   112940944   geranylgeranyl pyrophosphate synthase, chloroplastic-like 
 sot-r.1   102580033   geranylgeranyl pyrophosphate synthase 7, chloroplastic-like 
 sot-r.1   102580359   geranylgeranyl pyrophosphate synthase 7, chloroplastic-like 
 nta-r.1   107799555   geranylgeranyl pyrophosphate synthase 7, chloroplastic-like 

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Top 50 coexpressed genes to 101249319 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249319 (sly-u.5 coexpression data)

CoexMap"101249319"


slyLOC101249319 | Entrez gene ID : 101249319      
Species sly sot nta sbi ghi cre ath mtr tae cit bdi vvi ppo bra zma osa gma hvu bna
Paralog 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00900 [list] [network] Terpenoid backbone biosynthesis (57 genes)
GO BP
GO:0008299 [list] [network] isoprenoid biosynthetic process  (124 genes)  IEA  
GO CC
GO MF
GO:0004311 [list] [network] geranylgeranyl diphosphate synthase activity  (7 genes)  IEA  
Protein XP_025885317.1 [sequence] [blastp]
XP_069150615.1 [sequence] [blastp]
XP_069150616.1 [sequence] [blastp]
XP_069150617.1 [sequence] [blastp]
XP_069150618.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_025885317.1)
chlo 8,  mito 1  (predict for XP_069150615.1)
chlo 8,  mito 1  (predict for XP_069150616.1)
chlo 8,  mito 1  (predict for XP_069150617.1)
chlo 8,  mito 1  (predict for XP_069150618.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_025885317.1)
mito 7  (predict for XP_069150615.1)
mito 7  (predict for XP_069150616.1)
mito 7  (predict for XP_069150617.1)
mito 7  (predict for XP_069150618.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249319
sly-r.6
for
101249319
sly-u.5
for
112940944
sot-r.1
for
102580033
sot-r.1
for
102580359
nta-r.1
for
107799555


Ortholog ID: 22036
Species sly sly sot sot nta
Symbol LOC101249319 LOC112940944 LOC102580033 LOC102580359 LOC107799555
Function* geranylfarnesyl diphosphate synthase, chloroplastic-like geranylgeranyl pyrophosphate synthase, chloroplastic-like geranylgeranyl pyrophosphate synthase 7, chloroplastic-like geranylgeranyl pyrophosphate synthase 7, chloroplastic-like geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot00900 Terpenoid backbone biosynthesis 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot00900 Terpenoid backbone biosynthesis 2
sot03040 Spliceosome 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101249319 112940944 102580033 102580359 107799555
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