Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102580359   geranylgeranyl pyrophosphate synthase 7, chloroplastic-like 
 sot-r.1   102580033   geranylgeranyl pyrophosphate synthase 7, chloroplastic-like 
 sly-u.5   101249319   geranylfarnesyl diphosphate synthase, chloroplastic-like 
 sly-u.5   112940944   geranylgeranyl pyrophosphate synthase, chloroplastic-like 
 nta-r.1   107799555   geranylgeranyl pyrophosphate synthase 7, chloroplastic-like 

close


Top 50 coexpressed genes to 102580359 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102580359 (sot-r.1 coexpression data)

CoexMap"102580359"


sotLOC102580359 | Entrez gene ID : 102580359      
Species sot sly nta vvi bdi bna ppo sbi gma ghi cit hvu osa tae zma cre mtr ath bra
Paralog 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00900 [list] [network] Terpenoid backbone biosynthesis (66 genes)
GO BP
GO:0008299 [list] [network] isoprenoid biosynthetic process  (140 genes)  IEA  
GO CC
GO MF
GO:0004311 [list] [network] geranylgeranyl diphosphate synthase activity  (7 genes)  IEA  
Protein XP_006363134.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_006363134.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_006363134.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102580359
sot-r.1
for
102580033
sly-u.5
for
101249319
sly-u.5
for
112940944
nta-r.1
for
107799555


Ortholog ID: 22036
Species sot sot sly sly nta
Symbol LOC102580359 LOC102580033 LOC101249319 LOC112940944 LOC107799555
Function* geranylgeranyl pyrophosphate synthase 7, chloroplastic-like geranylgeranyl pyrophosphate synthase 7, chloroplastic-like geranylfarnesyl diphosphate synthase, chloroplastic-like geranylgeranyl pyrophosphate synthase, chloroplastic-like geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot00900 Terpenoid backbone biosynthesis 2
sot03040 Spliceosome 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot00900 Terpenoid backbone biosynthesis 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102580359 102580033 101249319 112940944 107799555
The preparation time of this page was 0.0 [sec].