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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250014   extensin 
 sly-r.6   101250014   extensin 
 sly-u.5   104645373   extensin-3-like 
 sly-u.5   544158   extensin-3 
 sly-u.5   101249726   extensin-3-like 
 sot-r.1   102582357   extensin-1-like 
 sot-r.1   102589775   extensin-3-like 
 sot-r.1   102605153   extensin-2 
 nta-r.1   107787804   uncharacterized LOC107787804 
 nta-r.1   107826255   uncharacterized LOC107826255 
 nta-r.1   107787803   uncharacterized LOC107787803 
 ath-u.5   EXT3   extensin 3 
 ath-u.5   EXT4   extensin 4 
 gma-u.5   102665310   extensin 
 gma-u.5   121174310   extensin-3 
 gma-u.5   100811729   extensin-2-like 
 bra-r.6   103872922   extensin-3 
 bra-r.6   103831883   extensin-3 
 bra-r.6   103829383   extensin-3 
 vvi-u.5   100265028   extensin 
 ppo-u.5   112327657   extensin-like 
 mtr-u.5   25484916   extensin-1 
 mtr-u.5   11428130   extensin-3 
 mtr-u.5   25496075   extensin-2 
 ghi-r.1   121228895   extensin 
 bna-r.1   111211596   extensin-3 
 bna-r.1   106358201   extensin-3-like 
 bna-r.1   106352980   extensin-3-like 

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Top 50 coexpressed genes to 101250014 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250014 (sly-u.5 coexpression data)

CoexMap"101250014"


slyLOC101250014 | Entrez gene ID : 101250014    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna zma cre sbi cit tae osa hvu bdi
Paralog 5 3 3 2 3 3 1 1 3 1 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009664 [list] [network] plant-type cell wall organization  (51 genes)  IEA  
GO CC
GO MF
GO:0005199 [list] [network] structural constituent of cell wall  (7 genes)  IEA  
Protein XP_010320499.2 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  vacu 2,  cyto 1,  golg 1  (predict for XP_010320499.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_010320499.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250014
sly-r.6
for
101250014
sly-u.5
for
104645373
sly-u.5
for
544158
sly-u.5
for
101249726
sot-r.1
for
102582357
sot-r.1
for
102589775
sot-r.1
for
102605153
nta-r.1
for
107787804
nta-r.1
for
107826255
nta-r.1
for
107787803
ath-u.5
for
EXT3
ath-u.5
for
EXT4
gma-u.5
for
102665310
gma-u.5
for
121174310
gma-u.5
for
100811729
bra-r.6
for
103872922
bra-r.6
for
103831883
bra-r.6
for
103829383
vvi-u.5
for
100265028
ppo-u.5
for
112327657
mtr-u.5
for
25484916
mtr-u.5
for
11428130
mtr-u.5
for
25496075
ghi-r.1
for
121228895
bna-r.1
for
111211596
bna-r.1
for
106358201
bna-r.1
for
106352980


Ortholog ID: 5201
Species sly sly sot sot sot nta nta nta ath ath gma gma gma bra bra bra vvi ppo mtr mtr mtr ghi bna bna bna
Symbol LOC544158 LOC101249726 LOC102582357 LOC102589775 LOC102605153 LOC107787804 LOC107787803 LOC107771653 EXT3 EXT4 LOC102665310 LOC121174310 LOC100811729 LOC103872922 LOC103831883 LOC103829383 LOC100265028 LOC112327657 LOC25496075 LOC25496069 LOC25496073 LOC121228895 LOC111211596 LOC106352980 LOC106347332
Function* extensin-3 extensin-3-like extensin-1-like extensin-3-like extensin-2 uncharacterized LOC107787804 uncharacterized LOC107787803 extensin-1-like extensin 3 extensin 4 extensin extensin-3 extensin-2-like extensin-3 extensin-3 extensin-3 extensin extensin-like extensin-2 extensin-2 extensin-2 extensin extensin-3 extensin-3-like extensin-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
sly00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 5
bra00920 Sulfur metabolism 4
bra01320 Sulfur cycle 4
bra00966 Glucosinolate biosynthesis 3
bra00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 7
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
vvi00941 Flavonoid biosynthesis 3
vvi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00350 Tyrosine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 544158 101249726 102582357 102589775 102605153 107787804 107787803 107771653 838728 844028 102665310 121174310 100811729 103872922 103831883 103829383 100265028 112327657 25496075 25496069 25496073 121228895 111211596 106352980 106347332
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