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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103872922   extensin-3 
 bra-r.6   103829383   extensin-3 
 bra-r.6   103831883   extensin-3 
 bna-r.1   106358201   extensin-3-like 
 bna-r.1   106347332   extensin-3 
 bna-r.1   106352980   extensin-3-like 
 ath-u.5   EXT3   extensin 3 
 ath-u.5   EXT4   extensin 4 
 ghi-r.1   121228895   extensin 
 gma-u.5   100811729   extensin-2-like 
 gma-u.5   121174310   extensin-3 
 gma-u.5   102665310   extensin 
 vvi-u.5   100265028   extensin 
 ppo-u.5   112327657   extensin-like 
 mtr-u.5   11428130   extensin-3 
 mtr-u.5   25484916   extensin-1 
 mtr-u.5   25496069   extensin-2 
 sly-u.5   101249726   extensin-3-like 
 sly-u.5   101250014   extensin 
 sot-r.1   102583036   extensin-3-like 
 sot-r.1   102582357   extensin-1-like 
 sot-r.1   102583692   extensin-1 
 nta-r.1   107800248   uncharacterized LOC107800248 
 nta-r.1   107787804   uncharacterized LOC107787804 
 nta-r.1   107787803   uncharacterized LOC107787803 

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Top 50 coexpressed genes to 103872922 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103872922 (bra-r.6 coexpression data)

CoexMap"103872922"


braLOC103872922 | Entrez gene ID : 103872922    
Species bra bna ath ghi gma vvi ppo mtr sly sot nta hvu bdi osa tae zma cre sbi cit
Paralog 3 3 2 1 3 1 1 3 2 3 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009664 [list] [network] plant-type cell wall organization  (83 genes)  IEA  
GO CC
GO MF
GO:0005199 [list] [network] structural constituent of cell wall  (18 genes)  IEA  
Protein XP_009149607.2 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  E.R. 2,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for XP_009149607.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_009149607.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103872922
bra-r.6
for
103829383
bra-r.6
for
103831883
bna-r.1
for
106358201
bna-r.1
for
106347332
bna-r.1
for
106352980
ath-u.5
for
EXT3
ath-u.5
for
EXT4
ghi-r.1
for
121228895
gma-u.5
for
100811729
gma-u.5
for
121174310
gma-u.5
for
102665310
vvi-u.5
for
100265028
ppo-u.5
for
112327657
mtr-u.5
for
11428130
mtr-u.5
for
25484916
mtr-u.5
for
25496069
sly-u.5
for
101249726
sly-u.5
for
101250014
sot-r.1
for
102583036
sot-r.1
for
102582357
sot-r.1
for
102583692
nta-r.1
for
107800248
nta-r.1
for
107787804
nta-r.1
for
107787803


Ortholog ID: 5201
Species bra bra bra bna bna bna ath ath ghi gma gma gma vvi ppo mtr mtr mtr sly sly sot sot sot nta nta nta
Symbol LOC103872922 LOC103829383 LOC103831883 LOC106347332 LOC106352980 LOC111211596 EXT3 EXT4 LOC121228895 LOC100811729 LOC121174310 LOC102665310 LOC100265028 LOC112327657 LOC25496069 LOC25496075 LOC25496073 LOC101249726 LOC544158 LOC102582357 LOC102589775 LOC102605153 LOC107787804 LOC107787803 LOC107771653
Function* extensin-3 extensin-3 extensin-3 extensin-3 extensin-3-like extensin-3 extensin 3 extensin 4 extensin extensin-2-like extensin-3 extensin extensin extensin-like extensin-2 extensin-2 extensin-2 extensin-3-like extensin-3 extensin-1-like extensin-3-like extensin-2 uncharacterized LOC107787804 uncharacterized LOC107787803 extensin-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 5
bra00920 Sulfur metabolism 4
bra01320 Sulfur cycle 4
bra00966 Glucosinolate biosynthesis 3
bra00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 7
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
vvi00941 Flavonoid biosynthesis 3
vvi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00350 Tyrosine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
sly00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103872922 103829383 103831883 106347332 106352980 111211596 838728 844028 121228895 100811729 121174310 102665310 100265028 112327657 25496069 25496075 25496073 101249726 544158 102582357 102589775 102605153 107787804 107787803 107771653
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