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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250719   cellulose synthase-like protein G3 
 sly-r.6   101250719   cellulose synthase-like protein G3 
 sly-u.5   101264405   cellulose synthase-like protein G3 
 sly-u.5   101250431   cellulose synthase-like protein G3 
 sly-u.5   101251018   cellulose synthase-like protein G3 
 sot-r.1   102604929   cellulose synthase-like protein G3 
 sot-r.1   102604590   cellulose synthase-like protein G3 
 sot-r.1   102587891   cellulose synthase-like protein G1 
 nta-r.1   107813389   cellulose synthase-like protein G3 
 nta-r.1   107797779   cellulose synthase-like protein G3 
 ath-u.5   CSLG3   cellulose synthase like G3 
 ath-u.5   CSLG2   cellulose synthase like G2 
 ath-u.5   CSLG1   cellulose synthase like G1 
 bra-r.6   103861638   cellulose synthase-like protein G2 
 bra-r.6   103861617   cellulose synthase-like protein G2 
 bra-r.6   103861455   cellulose synthase-like protein G3 
 vvi-u.5   100261528   cellulose synthase-like protein G3 
 vvi-u.5   100267402   cellulose synthase-like protein G3 
 ppo-u.5   7497865   cellulose synthase-like protein G3 
 ppo-u.5   18097057   cellulose synthase-like protein G3 
 ppo-u.5   7497862   cellulose synthase-like protein G3 
 ghi-r.1   107896451   cellulose synthase-like protein G2 
 ghi-r.1   107896452   cellulose synthase-like protein G3 
 bna-r.1   111207830   cellulose synthase-like protein G3 
 bna-r.1   106440557   cellulose synthase-like protein G3 
 cit-r.1   102625064   cellulose synthase-like protein G3 
 cit-r.1   102624770   cellulose synthase-like protein G3 

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Top 50 coexpressed genes to 101250719 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250719 (sly-u.5 coexpression data)

CoexMap"101250719"


slyLOC101250719 | Entrez gene ID : 101250719    
Species sly sot nta ath bra vvi ppo ghi bna cit bdi osa tae zma cre mtr sbi gma hvu
Paralog 5 3 2 3 3 2 3 2 2 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (30 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (44 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (105 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (30 genes)  IEA  
Protein XP_004245497.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 3,  nucl_plas 3,  golg_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for XP_004245497.2)
Subcellular
localization
TargetP
other 8  (predict for XP_004245497.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250719
sly-r.6
for
101250719
sly-u.5
for
101264405
sly-u.5
for
101250431
sly-u.5
for
101251018
sot-r.1
for
102604929
sot-r.1
for
102604590
sot-r.1
for
102587891
nta-r.1
for
107813389
nta-r.1
for
107797779
ath-u.5
for
CSLG3
ath-u.5
for
CSLG2
ath-u.5
for
CSLG1
bra-r.6
for
103861638
bra-r.6
for
103861617
bra-r.6
for
103861455
vvi-u.5
for
100261528
vvi-u.5
for
100267402
ppo-u.5
for
7497865
ppo-u.5
for
18097057
ppo-u.5
for
7497862
ghi-r.1
for
107896451
ghi-r.1
for
107896452
bna-r.1
for
111207830
bna-r.1
for
106440557
cit-r.1
for
102625064
cit-r.1
for
102624770


Ortholog ID: 3717
Species sly sly sly sot sot sot nta nta ath ath ath bra bra bra vvi vvi ppo ppo ppo ghi ghi bna bna cit cit
Symbol LOC101250719 LOC101264405 LOC101250431 LOC102604929 LOC102604590 LOC102587891 LOC107813389 LOC107797779 CSLG3 CSLG2 CSLG1 LOC103861638 LOC103861617 LOC103861455 LOC104881925 LOC100256514 LOC7497865 LOC18097057 LOC7497862 LOC107896451 LOC107890709 LOC106376003 LOC106414107 LOC102625064 LOC102624770
Function* cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G1 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase like G3 cellulose synthase like G2 cellulose synthase like G1 cellulose synthase-like protein G2 cellulose synthase-like protein G2 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G2 cellulose synthase-like protein G3 cellulose synthase-like protein G2 cellulose synthase-like protein G2 cellulose synthase-like protein G3 cellulose synthase-like protein G3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 5
sly00620 Pyruvate metabolism 3
sly01200 Carbon metabolism 3
sly01212 Fatty acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot01200 Carbon metabolism 3
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
ath02010 ABC transporters 2
ath04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00330 Arginine and proline metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
ppo01230 Biosynthesis of amino acids 4
ppo00030 Pentose phosphate pathway 3
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
cit00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101250719 101264405 101250431 102604929 102604590 102587891 107813389 107797779 828499 828500 828501 103861638 103861617 103861455 104881925 100256514 7497865 18097057 7497862 107896451 107890709 106376003 106414107 102625064 102624770
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