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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101264405   cellulose synthase-like protein G3 
 sly-r.6   101264405   cellulose synthase-like protein G3 
 sly-u.5   101251018   cellulose synthase-like protein G3 
 sly-u.5   101250431   cellulose synthase-like protein G3 
 sly-u.5   101250719   cellulose synthase-like protein G3 
 ath-u.5   CSLG3   cellulose synthase like G3 
 ath-u.5   CSLG2   cellulose synthase like G2 
 ath-u.5   CSLG1   cellulose synthase like G1 
 vvi-u.5   100261528   cellulose synthase-like protein G3 
 vvi-u.5   100267402   cellulose synthase-like protein G3 
 ppo-u.5   7497865   cellulose synthase-like protein G3 
 ppo-u.5   18097057   cellulose synthase-like protein G3 
 ppo-u.5   7497862   cellulose synthase-like protein G3 

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Top 50 coexpressed genes to 101264405 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101264405 (sly-u.5 coexpression data)

CoexMap"101264405"


slyLOC101264405 | Entrez gene ID : 101264405      
Species sly ath vvi ppo cre mtr ghi cit hvu bdi sot bra sbi osa tae nta gma zma bna
Paralog 5 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (30 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (44 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (105 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (30 genes)  IEA  
Protein XP_004251907.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  plas 1  (predict for XP_004251907.2)
Subcellular
localization
TargetP
other 5,  scret 3,  mito 3  (predict for XP_004251907.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101264405

.
sly-r.6
for
101264405

.
sly-u.5
for
101251018

.
sly-u.5
for
101250431

.
sly-u.5
for
101250719

.
ath-u.5
for
CSLG3

.
ath-u.5
for
CSLG2

.
ath-u.5
for
CSLG1

.
vvi-u.5
for
100261528

.
vvi-u.5
for
100267402

.
ppo-u.5
for
7497865

.
ppo-u.5
for
18097057

.
ppo-u.5
for
7497862

.


Ortholog ID: 3717
Species ath ath sly sly bra bra vvi ppo ppo ghi bna sot sot cit cit nta nta
Symbol CSLG3 CSLG2 LOC101264405 LOC101250431 LOC103861617 LOC103861638 LOC100256514 LOC7497862 LOC7497865 LOC107890709 LOC106414107 LOC102604590 LOC102604929 LOC102624770 LOC102625064 LOC107813389 LOC107797779
Function* cellulose synthase like G3 cellulose synthase like G2 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G2 cellulose synthase-like protein G2 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G2 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3 cellulose synthase-like protein G3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
ath02010 ABC transporters 2
ath04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 5
sly00620 Pyruvate metabolism 3
sly01200 Carbon metabolism 3
sly01212 Fatty acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00330 Arginine and proline metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
ppo01230 Biosynthesis of amino acids 4
ppo00030 Pentose phosphate pathway 3
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828499 828500 101264405 101250431 103861617 103861638 100256514 7497862 7497865 107890709 106414107 102604590 102604929 102624770 102625064 107813389 107797779
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