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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250761   small ribosomal subunit protein mL103 (rPPR7)-like 
 sly-r.6   101250761   small ribosomal subunit protein mL103 (rPPR7)-like 
 sly-u.5   101262915   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 sly-u.5   101263784   small ribosomal subunit protein mL103 (rPPR7) 
 sot-r.1   102595216   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 sot-r.1   102586023   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 sot-r.1   102602489   pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like 
 nta-r.1   107774337   small ribosomal subunit protein mL103 (rPPR7) 
 nta-r.1   107768085   small ribosomal subunit protein mL103 (rPPR7) 
 nta-r.1   107782940   small ribosomal subunit protein mL103 (rPPR7)-like 
 ath-u.5   AT2G18520   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT4G36680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G80150   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103853279   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 bra-r.6   103834994   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 bra-r.6   103830421   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 vvi-u.5   100246188   small ribosomal subunit protein mL103 (rPPR7) 
 vvi-u.5   100252569   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 ppo-u.5   18099300   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 ppo-u.5   7473155   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 ppo-u.5   7478361   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 mtr-u.5   11421506   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 ghi-r.1   107937384   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 ghi-r.1   121218644   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 ghi-r.1   107945662   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 bna-r.1   106398642   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 bna-r.1   125600251   pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like 
 bna-r.1   125584011   pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like 
 cit-r.1   127903648   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 cit-r.1   102619638   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 osa-u.5   4330066   small ribosomal subunit protein mL103 (rPPR7) 
 osa-u.5   4345942   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 zma-u.5   100383318   Pentatricopeptide repeat-containing protein mitochondrial 
 zma-u.5   100191780   uncharacterized LOC100191780 
 tae-r.2   123164034   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 tae-r.2   123127696   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 hvu-r.1   123407780   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 hvu-r.1   123401299   pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like 
 sbi-r.1   8055213   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 sbi-r.1   8066184   pentatricopeptide repeat-containing protein At2g18520, mitochondrial 
 bdi-r.1   100832983   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 bdi-r.1   100846739   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 

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Top 50 coexpressed genes to 101250761 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250761 (sly-u.5 coexpression data)

CoexMap"101250761"


slyLOC101250761 | Entrez gene ID : 101250761    
Species sly sot nta ath bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi gma cre
Paralog 4 3 3 3 3 2 3 1 3 3 2 2 2 2 2 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004232380.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_004232380.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_004232380.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250761
sly-r.6
for
101250761
sly-u.5
for
101262915
sly-u.5
for
101263784
sot-r.1
for
102595216
sot-r.1
for
102586023
sot-r.1
for
102602489
nta-r.1
for
107774337
nta-r.1
for
107768085
nta-r.1
for
107782940
ath-u.5
for
AT2G18520
ath-u.5
for
AT4G36680
ath-u.5
for
AT1G80150
bra-r.6
for
103853279
bra-r.6
for
103834994
bra-r.6
for
103830421
vvi-u.5
for
100246188
vvi-u.5
for
100252569
ppo-u.5
for
18099300
ppo-u.5
for
7473155
ppo-u.5
for
7478361
mtr-u.5
for
11421506
ghi-r.1
for
107937384
ghi-r.1
for
121218644
ghi-r.1
for
107945662
bna-r.1
for
106398642
bna-r.1
for
125600251
bna-r.1
for
125584011
cit-r.1
for
127903648
cit-r.1
for
102619638
osa-u.5
for
4330066
osa-u.5
for
4345942
zma-u.5
for
100383318
zma-u.5
for
100191780
tae-r.2
for
123164034
tae-r.2
for
123127696
hvu-r.1
for
123407780
hvu-r.1
for
123401299
sbi-r.1
for
8055213
sbi-r.1
for
8066184
bdi-r.1
for
100832983
bdi-r.1
for
100846739


Ortholog ID: 2532
Species sly sly sot sot sot nta nta nta ath ath ath bra bra bra vvi vvi ppo ppo ppo mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC101262915 LOC101263784 LOC102595216 LOC102586023 LOC102602489 LOC107768085 LOC107782940 LOC107822620 AT2G18520 AT4G36680 AT1G80150 LOC103834994 LOC103830421 LOC103837864 LOC100246188 LOC100252569 LOC18099300 LOC7473155 LOC7478361 LOC11421506 LOC107937384 LOC121218644 LOC107926679 LOC106347022 LOC106435094 LOC106441776 LOC127903648 LOC102619638 LOC4330066 LOC4345942 LOC100383318 LOC100191780 LOC123164034 LOC123137556 LOC123407780 LOC123401299 LOC8055213 LOC8066184 LOC100832983 LOC100846739
Function* pentatricopeptide repeat-containing protein At1g80150, mitochondrial small ribosomal subunit protein mL103 (rPPR7) pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like small ribosomal subunit protein mL103 (rPPR7) small ribosomal subunit protein mL103 (rPPR7)-like pentatricopeptide repeat-containing protein At1g80150, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At2g18520, mitochondrial small ribosomal subunit protein mL103 (rPPR7) pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like pentatricopeptide repeat-containing protein At2g18520, mitochondrial-like pentatricopeptide repeat-containing protein At2g18520, mitochondrial-like pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial small ribosomal subunit protein mL103 (rPPR7) pentatricopeptide repeat-containing protein At1g80150, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial uncharacterized LOC100191780 pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At2g18520, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi01230 Biosynthesis of amino acids 4
vvi00260 Glycine, serine and threonine metabolism 2
vvi00261 Monobactam biosynthesis 2
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03013 Nucleocytoplasmic transport 2
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03013 Nucleocytoplasmic transport 2
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
zma00240 Pyrimidine metabolism 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262915 101263784 102595216 102586023 102602489 107768085 107782940 107822620 816367 829821 844355 103834994 103830421 103837864 100246188 100252569 18099300 7473155 7478361 11421506 107937384 121218644 107926679 106347022 106435094 106441776 127903648 102619638 4330066 4345942 100383318 100191780 123164034 123137556 123407780 123401299 8055213 8066184 100832983 100846739
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