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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250906   thymidylate kinase 
 sly-r.6   101250906   thymidylate kinase 
 ath-u.5   ZEU1   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100778161   thymidylate kinase-like protein 
 vvi-u.5   100245592   thymidylate kinase 
 ppo-u.5   7456211   thymidylate kinase 
 mtr-u.5   11405368   thymidylate kinase 
 mtr-u.5   25480774   thymidylate kinase 
 osa-u.5   4344056   thymidylate kinase 
 zma-u.5   103647875   thymidylate kinase 

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Top 50 coexpressed genes to 101250906 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250906 (sly-u.5 coexpression data)

CoexMap"101250906"


slyLOC101250906 | Entrez gene ID : 101250906      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00240 [list] [network] Pyrimidine metabolism (66 genes)
sly01232 [list] [network] Nucleotide metabolism (84 genes)
GO BP
GO:0006227 [list] [network] dUDP biosynthetic process  (1 genes)  IEA  
GO:0006233 [list] [network] dTDP biosynthetic process  (1 genes)  IEA  
GO:0006235 [list] [network] dTTP biosynthetic process  (1 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0004798 [list] [network] dTMP kinase activity  (1 genes)  IEA  
GO:0004550 [list] [network] nucleoside diphosphate kinase activity  (8 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_004243542.1 [sequence] [blastp]
XP_010323874.1 [sequence] [blastp]
XP_010323875.1 [sequence] [blastp]
XP_025887815.1 [sequence] [blastp]
XP_025887817.1 [sequence] [blastp]
XP_069143110.1 [sequence] [blastp]
XP_069143111.1 [sequence] [blastp]
XP_069143112.1 [sequence] [blastp]
XP_069143113.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_004243542.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_010323874.1)
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_010323875.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_025887815.1)
nucl 4,  cyto 2,  cyto_E.R. 1,  chlo 1,  extr 1  (predict for XP_025887817.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_069143110.1)
chlo 8,  cyto 1,  mito 1,  extr 1  (predict for XP_069143111.1)
nucl 4,  cyto 2,  cyto_E.R. 1,  chlo 1,  extr 1  (predict for XP_069143112.1)
nucl 4,  cyto 2,  cyto_E.R. 1,  chlo 1,  extr 1  (predict for XP_069143113.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_004243542.1)
chlo 7,  mito 4  (predict for XP_010323874.1)
chlo 8  (predict for XP_010323875.1)
mito 5  (predict for XP_025887815.1)
other 7  (predict for XP_025887817.1)
chlo 7,  mito 4  (predict for XP_069143110.1)
chlo 8  (predict for XP_069143111.1)
other 7  (predict for XP_069143112.1)
other 7  (predict for XP_069143113.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250906
sly-r.6
for
101250906
ath-u.5
for
ZEU1
gma-u.5
for
100778161
vvi-u.5
for
100245592
ppo-u.5
for
7456211
mtr-u.5
for
11405368
mtr-u.5
for
25480774
osa-u.5
for
4344056
zma-u.5
for
103647875


Ortholog ID: 7770
Species sly sot nta nta ath gma bra vvi ppo mtr mtr ghi ghi bna cit osa zma tae tae hvu sbi bdi cre cre
Symbol LOC101250906 LOC102597929 LOC107767328 LOC107818071 ZEU1 LOC100778161 LOC103845368 LOC100245592 LOC7456211 LOC11405368 LOC25480774 LOC107953926 LOC107912769 LOC106420380 LOC102613130 LOC4344056 LOC103647875 LOC123187795 LOC123051913 LOC123425079 LOC8063548 LOC100846276 CHLRE_03g190750v5 CHLRE_03g190800v5
Function* thymidylate kinase thymidylate kinase thymidylate kinase-like thymidylate kinase-like P-loop containing nucleoside triphosphate hydrolases superfamily protein thymidylate kinase-like protein thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase-like thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
sly00240 Pyrimidine metabolism 5
sly01232 Nucleotide metabolism 5
sly03460 Fanconi anemia pathway 3
sly03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 8
nta01232 Nucleotide metabolism 8
nta00230 Purine metabolism 6
nta00480 Glutathione metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 8
nta01232 Nucleotide metabolism 8
nta00230 Purine metabolism 6
nta00480 Glutathione metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03082 ATP-dependent chromatin remodeling 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi01232 Nucleotide metabolism 2
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01232 Nucleotide metabolism 3
mtr00020 Citrate cycle (TCA cycle) 3
mtr01200 Carbon metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01232 Nucleotide metabolism 8
bna00230 Purine metabolism 7
bna00250 Alanine, aspartate and glutamate metabolism 7
bna01240 Biosynthesis of cofactors 7
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01210 2-Oxocarboxylic acid metabolism 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03008 Ribosome biogenesis in eukaryotes 6
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi04120 Ubiquitin mediated proteolysis 4
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101250906 102597929 107767328 107818071 836063 100778161 103845368 100245592 7456211 11405368 25480774 107953926 107912769 106420380 102613130 4344056 103647875 123187795 123051913 123425079 8063548 100846276 5717527 5717528
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