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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101251494   beta-amylase 8 
 sly-r.6   101251494   beta-amylase 8 
 sot-r.1   102598339   beta-amylase 8 
 nta-r.1   107795612   beta-amylase 8 
 nta-r.1   107786698   beta-amylase 8 
 ath-u.5   BMY2   beta-amylase 2 
 gma-u.5   100816365   beta-amylase 8 
 gma-u.5   100777004   beta-amylase 8 
 bra-r.6   103853626   beta-amylase 8 
 vvi-u.5   100254478   beta-amylase 8 
 ppo-u.5   7491925   beta-amylase 8 
 mtr-u.5   11407894   beta-amylase 8 
 ghi-r.1   107944311   beta-amylase 8 
 ghi-r.1   107933475   beta-amylase 8 
 bna-r.1   106361233   beta-amylase 8 
 bna-r.1   106425547   beta-amylase 8 
 cit-r.1   102616084   beta-amylase 8 
 osa-u.5   4328183   beta-amylase 8 
 tae-r.2   123143529   beta-amylase 8 
 tae-r.2   123136044   beta-amylase 8 
 tae-r.2   123131992   beta-amylase 8 
 hvu-r.1   123402403   beta-amylase 8 
 sbi-r.1   8069915   beta-amylase 8 
 bdi-r.1   100832151   beta-amylase 8 

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Top 50 coexpressed genes to 101251494 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101251494 (sly-u.5 coexpression data)

CoexMap"101251494"


slyLOC101251494 | Entrez gene ID : 101251494      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa tae hvu sbi bdi zma cre
Paralog 2 1 2 1 2 1 1 1 1 2 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00500 [list] [network] Starch and sucrose metabolism (146 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (57 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (8 genes)  IEA  
Protein XP_004244442.2 [sequence] [blastp]
XP_010324502.2 [sequence] [blastp]
XP_010324503.2 [sequence] [blastp]
XP_010324504.2 [sequence] [blastp]
XP_010324505.2 [sequence] [blastp]
XP_069144183.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_004244442.2)
nucl 9  (predict for XP_010324502.2)
nucl 9  (predict for XP_010324503.2)
nucl 9  (predict for XP_010324504.2)
nucl 9  (predict for XP_010324505.2)
nucl 9  (predict for XP_069144183.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_004244442.2)
other 7,  chlo 3  (predict for XP_010324502.2)
other 7,  chlo 3  (predict for XP_010324503.2)
other 7,  chlo 3  (predict for XP_010324504.2)
other 7,  chlo 3  (predict for XP_010324505.2)
other 7,  chlo 3  (predict for XP_069144183.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101251494
sly-r.6
for
101251494
sot-r.1
for
102598339
nta-r.1
for
107795612
nta-r.1
for
107786698
ath-u.5
for
BMY2
gma-u.5
for
100816365
gma-u.5
for
100777004
bra-r.6
for
103853626
vvi-u.5
for
100254478
ppo-u.5
for
7491925
mtr-u.5
for
11407894
ghi-r.1
for
107944311
ghi-r.1
for
107933475
bna-r.1
for
106361233
bna-r.1
for
106425547
cit-r.1
for
102616084
osa-u.5
for
4328183
tae-r.2
for
123143529
tae-r.2
for
123136044
tae-r.2
for
123131992
hvu-r.1
for
123402403
sbi-r.1
for
8069915
bdi-r.1
for
100832151


Ortholog ID: 11436
Species sly sot nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa tae tae tae hvu sbi bdi
Symbol LOC101251494 LOC102598339 LOC107795612 LOC107786698 BMY2 LOC100816365 LOC100777004 LOC103853626 LOC100254478 LOC7491925 LOC11407894 LOC107944311 LOC107933475 LOC106361233 LOC106425547 LOC102616084 LOC4328183 LOC123143529 LOC123136044 LOC123131992 LOC123402403 LOC8069915 LOC100832151
Function* beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 2 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly00500 Starch and sucrose metabolism 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01230 Biosynthesis of amino acids 4
sot03010 Ribosome 4
sot00770 Pantothenate and CoA biosynthesis 3
sot01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta04141 Protein processing in endoplasmic reticulum 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00660 C5-Branched dibasic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae03020 RNA polymerase 3
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 6
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101251494 102598339 107795612 107786698 834566 100816365 100777004 103853626 100254478 7491925 11407894 107944311 107933475 106361233 106425547 102616084 4328183 123143529 123136044 123131992 123402403 8069915 100832151
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