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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101253649   uncharacterized LOC101253649 
 sly-r.6   101253649   uncharacterized LOC101253649 
 sly-u.5   101249125   uncharacterized LOC101249125 
 sly-u.5   101253343   uncharacterized LOC101253343 
 sot-r.1   107061167   putative rRNA methyltransferase 
 sot-r.1   102580936   putative rRNA methyltransferase 
 sot-r.1   102589886   putative rRNA methyltransferase 
 nta-r.1   107803210   uncharacterized LOC107803210 
 nta-r.1   107795393   uncharacterized LOC107795393 
 nta-r.1   107762194   uncharacterized LOC107762194 
 ath-u.5   AT4G25730   FtsJ-like methyltransferase family protein 
 gma-u.5   100784758   adoMet-dependent rRNA methyltransferase spb1 
 gma-u.5   100790741   adoMet-dependent rRNA methyltransferase spb1 
 bra-r.6   103834857   pre-rRNA 2'-O-ribose RNA methyltransferase 
 bra-r.6   103861588   pre-rRNA 2'-O-ribose RNA methyltransferase 
 vvi-u.5   100255646   adoMet-dependent rRNA methyltransferase spb1 
 ppo-u.5   7456367   adoMet-dependent rRNA methyltransferase spb1 
 mtr-u.5   11439257   pre-rRNA 2'-O-ribose RNA methyltransferase 
 ghi-r.1   107927920   adoMet-dependent rRNA methyltransferase spb1 
 ghi-r.1   107908786   adoMet-dependent rRNA methyltransferase spb1 
 bna-r.1   106440860   pre-rRNA 2'-O-ribose RNA methyltransferase 
 bna-r.1   106417881   pre-rRNA 2'-O-ribose RNA methyltransferase 
 bna-r.1   106410652   pre-rRNA 2'-O-ribose RNA methyltransferase 
 cit-r.1   102627301   adoMet-dependent rRNA methyltransferase spb1 
 osa-u.5   4339641   uncharacterized LOC4339641 
 zma-u.5   103635342   putative rRNA methyltransferase 
 zma-u.5   100381782   uncharacterized LOC100381782 
 tae-r.2   123068768   pre-rRNA 2'-O-ribose RNA methyltransferase 
 tae-r.2   123183173   pre-rRNA 2'-O-ribose RNA methyltransferase 
 tae-r.2   123146631   pre-rRNA 2'-O-ribose RNA methyltransferase 
 hvu-r.1   123450761   pre-rRNA 2'-O-ribose RNA methyltransferase 
 sbi-r.1   8074609   putative rRNA methyltransferase 
 bdi-r.1   100838173   adoMet-dependent rRNA methyltransferase spb1 
 cre-r.1   CHLRE_12g529500v5   uncharacterized protein 

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Top 50 coexpressed genes to 101253649 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101253649 (sly-u.5 coexpression data)

CoexMap"101253649"


slyLOC101253649 | Entrez gene ID : 101253649    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 1 2 2 1 1 1 2 3 1 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (21 genes)  IEA  
GO:0000466 [list] [network] maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (22 genes)  IEA  
GO:0031167 [list] [network] rRNA methylation  (23 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (24 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0008650 [list] [network] rRNA (uridine-2'-O-)-methyltransferase activity  (3 genes)  IEA  
GO:0016435 [list] [network] rRNA (guanine) methyltransferase activity  (6 genes)  IEA  
Protein XP_004250420.2 [sequence] [blastp]
XP_069147714.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  chlo_mito 3  (predict for XP_004250420.2)
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_069147714.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_004250420.2)
scret 8,  mito 4  (predict for XP_069147714.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101253649
sly-r.6
for
101253649
sly-u.5
for
101249125
sly-u.5
for
101253343
sot-r.1
for
107061167
sot-r.1
for
102580936
sot-r.1
for
102589886
nta-r.1
for
107803210
nta-r.1
for
107795393
nta-r.1
for
107762194
ath-u.5
for
AT4G25730
gma-u.5
for
100784758
gma-u.5
for
100790741
bra-r.6
for
103834857
bra-r.6
for
103861588
vvi-u.5
for
100255646
ppo-u.5
for
7456367
mtr-u.5
for
11439257
ghi-r.1
for
107927920
ghi-r.1
for
107908786
bna-r.1
for
106440860
bna-r.1
for
106417881
bna-r.1
for
106410652
cit-r.1
for
102627301
osa-u.5
for
4339641
zma-u.5
for
103635342
zma-u.5
for
100381782
tae-r.2
for
123068768
tae-r.2
for
123183173
tae-r.2
for
123146631
hvu-r.1
for
123450761
sbi-r.1
for
8074609
bdi-r.1
for
100838173
cre-r.1
for
CHLRE_12g529500v5


Ortholog ID: 5556
Species sly sly sly sot sot sot nta nta nta ath gma gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC101253649 LOC101249125 LOC101253343 LOC107061167 LOC102580936 LOC102589886 LOC107803210 LOC107762194 LOC107760171 AT4G25730 LOC100784758 LOC100790741 LOC103834857 LOC103861588 LOC100255646 LOC7456367 LOC11439257 LOC107927920 LOC107908786 LOC106440860 LOC106410652 LOC106359047 LOC102627301 LOC4339641 LOC103635342 LOC100381782 LOC123068768 LOC123183173 LOC123146631 LOC123450761 LOC8074609 LOC100838173 CHLRE_12g529500v5
Function* uncharacterized LOC101253649 uncharacterized LOC101249125 uncharacterized LOC101253343 putative rRNA methyltransferase putative rRNA methyltransferase putative rRNA methyltransferase uncharacterized LOC107803210 uncharacterized LOC107762194 uncharacterized LOC107760171 FtsJ-like methyltransferase family protein adoMet-dependent rRNA methyltransferase spb1 adoMet-dependent rRNA methyltransferase spb1 pre-rRNA 2'-O-ribose RNA methyltransferase pre-rRNA 2'-O-ribose RNA methyltransferase adoMet-dependent rRNA methyltransferase spb1 adoMet-dependent rRNA methyltransferase spb1 pre-rRNA 2'-O-ribose RNA methyltransferase adoMet-dependent rRNA methyltransferase spb1 adoMet-dependent rRNA methyltransferase spb1 pre-rRNA 2'-O-ribose RNA methyltransferase pre-rRNA 2'-O-ribose RNA methyltransferase pre-rRNA 2'-O-ribose RNA methyltransferase adoMet-dependent rRNA methyltransferase spb1 uncharacterized LOC4339641 putative rRNA methyltransferase uncharacterized LOC100381782 pre-rRNA 2'-O-ribose RNA methyltransferase pre-rRNA 2'-O-ribose RNA methyltransferase pre-rRNA 2'-O-ribose RNA methyltransferase pre-rRNA 2'-O-ribose RNA methyltransferase putative rRNA methyltransferase adoMet-dependent rRNA methyltransferase spb1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101253649 101249125 101253343 107061167 102580936 102589886 107803210 107762194 107760171 828678 100784758 100790741 103834857 103861588 100255646 7456367 11439257 107927920 107908786 106440860 106410652 106359047 102627301 4339641 103635342 100381782 123068768 123183173 123146631 123450761 8074609 100838173 5722423
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