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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254142   cellulose synthase-like protein D4 
 sly-r.6   101254142   cellulose synthase-like protein D4 
 sly-u.5   101261522   cellulose synthase-like protein D1 
 sly-u.5   101249747   cellulose synthase-like protein D3 
 sly-u.5   101247596   cellulose synthase-like protein D3 
 ath-u.5   CSLD1   cellulose synthase-like D1 
 ath-u.5   CSLD3   cellulose synthase-like D3 
 ath-u.5   CSLD4   cellulose synthase like D4 
 gma-u.5   100807607   cellulose synthase-like protein D4 
 gma-u.5   100813900   cellulose synthase-like protein D2 
 gma-u.5   100786644   cellulose synthase-like protein D2 
 vvi-u.5   100261385   cellulose synthase-like protein D3 
 vvi-u.5   100267420   cellulose synthase-like protein D4 
 vvi-u.5   100247219   cellulose synthase-like protein D2 
 ppo-u.5   7478856   cellulose synthase-like protein D5 
 ppo-u.5   18094117   cellulose synthase-like protein D3 
 mtr-u.5   11424821   cellulose synthase-like protein D2 
 mtr-u.5   11421507   cellulose synthase-like protein D5 
 osa-u.5   4339895   cellulose synthase-like protein D2 
 zma-u.5   103637736   cellulose synthase-like protein D1 
 zma-u.5   100383550   uncharacterized LOC100383550 
 zma-u.5   100216739   Putative cellulose synthase-like family protein 

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Top 50 coexpressed genes to 101254142 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254142 (sly-u.5 coexpression data)

CoexMap"101254142"


slyLOC101254142 | Entrez gene ID : 101254142      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 2 2 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (30 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (44 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (105 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (30 genes)  IEA  
Protein XP_004249009.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_004249009.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_004249009.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254142

.
sly-r.6
for
101254142

.
sly-u.5
for
101261522

.
sly-u.5
for
101249747

.
sly-u.5
for
101247596

.
ath-u.5
for
CSLD1

.
ath-u.5
for
CSLD3

.
ath-u.5
for
CSLD4

.
gma-u.5
for
100807607

.
gma-u.5
for
100813900

.
gma-u.5
for
100786644

.
vvi-u.5
for
100261385

.
vvi-u.5
for
100267420

.
vvi-u.5
for
100247219

.
ppo-u.5
for
7478856

.
ppo-u.5
for
18094117

.
mtr-u.5
for
11424821

.
mtr-u.5
for
11421507

.
osa-u.5
for
4339895

.
zma-u.5
for
103637736

.
zma-u.5
for
100383550

.
zma-u.5
for
100216739

.


Ortholog ID: 440
Species ath ath gma gma sly sly osa zma zma bra vvi vvi mtr mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CSLD4 CSLD5 LOC100792604 LOC100785722 LOC101243911 LOC101262856 LOC107276048 LOC100383550 LOC103638409 LOC103855125 LOC100243459 LOC100261385 LOC11441666 LOC11424821 LOC123088406 LOC123413070 LOC107898894 LOC107946051 LOC106354438 LOC106423094 LOC8066890 LOC102583574 LOC102625040 LOC100834644 LOC107800066 LOC107821064
Function* cellulose synthase like D4 cellulose synthase-like D5 cellulose synthase-like protein D2 cellulose synthase-like protein D1 cellulose synthase-like protein D3 cellulose synthase-like protein D5 cellulose synthase-like protein D4 uncharacterized LOC100383550 cellulose synthase-like protein D5 cellulose synthase-like protein D3 cellulose synthase-like protein D5 cellulose synthase-like protein D3 cellulose synthase-like protein D3 cellulose synthase-like protein D2 cellulose synthase-like protein D2 cellulose synthase-like protein D2 cellulose synthase-like protein D4 cellulose synthase-like protein D5 cellulose synthase-like protein D2 cellulose synthase-like protein D5 cellulose synthase-like protein D2 cellulose synthase-like protein D5 cellulose synthase-like protein D3 cellulose synthase-like protein D2 cellulose synthase-like protein D1 cellulose synthase-like protein D3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00541 Biosynthesis of various nucleotide sugars 3
zma01250 Biosynthesis of nucleotide sugars 3
zma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 6
vvi00520 Amino sugar and nucleotide sugar metabolism 4
vvi00053 Ascorbate and aldarate metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 2
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 3
ghi04016 MAPK signaling pathway - plant 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829975 839467 100792604 100785722 101243911 101262856 107276048 100383550 103638409 103855125 100243459 100261385 11441666 11424821 123088406 123413070 107898894 107946051 106354438 106423094 8066890 102583574 102625040 100834644 107800066 107821064
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