ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123040752	cellulose synthase-like protein D3
tae-r.2	123102592	cellulose synthase-like protein D4
hvu-r.1	123452617	cellulose synthase-like protein D4
bdi-r.1	100834644	cellulose synthase-like protein D2
bdi-r.1	100827081	cellulose synthase-like protein D1
osa-u.5	4339895	cellulose synthase-like protein D2
zma-u.5	100383550	uncharacterized LOC100383550
zma-u.5	103638409	cellulose synthase-like protein D5
zma-u.5	100216739	Putative cellulose synthase-like family protein
sbi-r.1	8055128	cellulose synthase-like protein D1
sbi-r.1	8066890	cellulose synthase-like protein D2
sbi-r.1	8068819	cellulose synthase-like protein D4
ath-u.5	CSLD1	cellulose synthase-like D1
ath-u.5	CSLD3	cellulose synthase-like D3
ath-u.5	CSLD4	cellulose synthase like D4
gma-u.5	100804687	cellulose synthase-like protein D5
gma-u.5	100807607	cellulose synthase-like protein D4
gma-u.5	100813900	cellulose synthase-like protein D2
sly-u.5	101261522	cellulose synthase-like protein D1
sly-u.5	101254142	cellulose synthase-like protein D4
sly-u.5	101249747	cellulose synthase-like protein D3
bra-r.6	103855125	cellulose synthase-like protein D3
vvi-u.5	100261385	cellulose synthase-like protein D3
vvi-u.5	100267420	cellulose synthase-like protein D4
vvi-u.5	100247219	cellulose synthase-like protein D2
ppo-u.5	7491280	cellulose synthase-like protein D5
ppo-u.5	18094117	cellulose synthase-like protein D3
mtr-u.5	11424821	cellulose synthase-like protein D2
ghi-r.1	107946051	cellulose synthase-like protein D5
ghi-r.1	107950561	cellulose synthase-like protein D3
bna-r.1	106432842	cellulose synthase-like protein D3
bna-r.1	106371967	cellulose synthase-like protein D2
bna-r.1	106377107	cellulose synthase-like protein D1
sot-r.1	102583679	cellulose synthase-like protein D2
cit-r.1	102615911	cellulose synthase-like protein D3
nta-r.1	107781415	cellulose synthase-like protein D5
nta-r.1	107771119	cellulose synthase-like protein D5
nta-r.1	107763004	cellulose synthase-like protein D3

Top 50 coexpressed genes to 123040752 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123040752 (tae-r.2 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

cellulose synthase-like protein D3

KEGG

GO BP

GO:0030244 [list] [network] cellulose biosynthetic process

(129 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(10843 genes)

IEA

GO MF

GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity

(95 genes)

IEA

Protein

XP_044319450.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, E.R. 1, chlo 1, mito 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_044319450.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_044319450.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123040752	tae-r.2 for 123102592	hvu-r.1 for 123452617	bdi-r.1 for 100834644	bdi-r.1 for 100827081	osa-u.5 for 4339895	zma-u.5 for 100383550	zma-u.5 for 103638409	zma-u.5 for 100216739	sbi-r.1 for 8055128	sbi-r.1 for 8066890	sbi-r.1 for 8068819	ath-u.5 for CSLD1	ath-u.5 for CSLD3	ath-u.5 for CSLD4	gma-u.5 for 100804687	gma-u.5 for 100807607	gma-u.5 for 100813900	sly-u.5 for 101261522	sly-u.5 for 101254142	sly-u.5 for 101249747	bra-r.6 for 103855125	vvi-u.5 for 100261385	vvi-u.5 for 100267420	vvi-u.5 for 100247219	ppo-u.5 for 7491280	ppo-u.5 for 18094117	mtr-u.5 for 11424821	ghi-r.1 for 107946051	ghi-r.1 for 107950561	bna-r.1 for 106432842	bna-r.1 for 106371967	bna-r.1 for 106377107	sot-r.1 for 102583679	cit-r.1 for 102615911	nta-r.1 for 107781415	nta-r.1 for 107771119	nta-r.1 for 107763004

Please wait a moment.

Ortholog

Ortholog ID: 440

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

CSLD4

CSLD2

CSLD5

Function^*

cellulose synthase-like protein D2

cellulose synthase-like protein D4

cellulose synthase-like protein D1

cellulose synthase-like protein D4

uncharacterized LOC100383550

cellulose synthase-like protein D5

Putative cellulose synthase-like family protein

cellulose synthase-like protein D1

cellulose synthase-like protein D2

cellulose synthase like D4

cellulose-synthase like D2

cellulose synthase-like D5

cellulose synthase-like protein D1

cellulose synthase-like protein D3

cellulose synthase-like protein D2

cellulose synthase-like protein D3

cellulose synthase-like protein D5

cellulose synthase-like protein D3

cellulose synthase-like protein D2

cellulose synthase-like protein D3

cellulose synthase-like protein D4

cellulose synthase-like protein D5

cellulose synthase-like protein D3

cellulose synthase-like protein D2

cellulose synthase-like protein D3

cellulose synthase-like protein D5

cellulose synthase-like protein D4

cellulose synthase

cellulose synthase-like protein D1

cellulose synthase-like protein D2

cellulose synthase-like protein D5

cellulose synthase-like protein D2

cellulose synthase-like protein D5

cellulose synthase-like protein D3

cellulose synthase-like protein D1

cellulose synthase-like protein D3

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00541	Biosynthesis of various nucleotide sugars	3
zma01250	Biosynthesis of nucleotide sugars	3
zma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01250	Biosynthesis of nucleotide sugars	6
vvi00520	Amino sugar and nucleotide sugar metabolism	4
vvi00053	Ascorbate and aldarate metabolism	3
vvi01240	Biosynthesis of cofactors	3
vvi00541	Biosynthesis of various nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00480	Glutathione metabolism	4
vvi04120	Ubiquitin mediated proteolysis	3
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	3
ghi04016	MAPK signaling pathway - plant	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

123088406

123413070

100834644

100845417

4349505

107276048

100383550

103638409

100216739

8055128

8066890

829975

831554

839467

100785722

100785985

100792604

101247596

101243911

101262856

103855125

103851073

100261385

100267420

100243459

18094117

11424821

11441666

11421507

107946051

107898894

107948896

106401091

106354438

106423094

102583679

102583574

102625040

107821582

107800066

107821064

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	1	2	1	3	3	3	3	3	1	3	2	1	2	3	1	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123040752 (tae-r.2 coexpression data)

Top 50 enrichment test to 123040752 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**