ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101255775	pectin methylesterase
sly-r.6	101255775	pectin methylesterase
sly-u.5	101258375	probable pectinesterase/pectinesterase inhibitor 34
sot-r.1	102606318	probable pectinesterase/pectinesterase inhibitor 61
sot-r.1	102598997	probable pectinesterase/pectinesterase inhibitor 34
nta-r.1	107815257	putative pectinesterase/pectinesterase inhibitor 34
nta-r.1	107826812	putative pectinesterase/pectinesterase inhibitor 61
nta-r.1	107808989	putative pectinesterase/pectinesterase inhibitor 61
ath-u.5	AT3G49220	Plant invertase/pectin methylesterase inhibitor superfamily
ath-u.5	PMEPCRF	pectin methylesterase PCR fragment F
gma-u.5	100808236	probable pectinesterase/pectinesterase inhibitor 61
gma-u.5	100776752	probable pectinesterase/pectinesterase inhibitor 34
gma-u.5	106796002	probable pectinesterase/pectinesterase inhibitor 61
bra-r.6	103844813	probable pectinesterase/pectinesterase inhibitor 61
bra-r.6	103875179	probable pectinesterase/pectinesterase inhibitor 34
bra-r.6	103873080	probable pectinesterase/pectinesterase inhibitor 34
vvi-u.5	100258861	probable pectinesterase/pectinesterase inhibitor 34
ppo-u.5	7475195	probable pectinesterase/pectinesterase inhibitor 34
ppo-u.5	7496396	probable pectinesterase/pectinesterase inhibitor 34
mtr-u.5	11441469	probable pectinesterase/pectinesterase inhibitor 34
mtr-u.5	11432815	probable pectinesterase/pectinesterase inhibitor 61
ghi-r.1	107904569	probable pectinesterase/pectinesterase inhibitor 34
ghi-r.1	107924268	probable pectinesterase/pectinesterase inhibitor 34
ghi-r.1	107929581	probable pectinesterase/pectinesterase inhibitor 34
bna-r.1	106357682	probable pectinesterase/pectinesterase inhibitor 34
bna-r.1	106347430	probable pectinesterase/pectinesterase inhibitor 34
bna-r.1	106452313	probable pectinesterase/pectinesterase inhibitor 34
cit-r.1	102624576	probable pectinesterase/pectinesterase inhibitor 61
osa-u.5	9270906	probable pectinesterase/pectinesterase inhibitor 34
zma-u.5	100285544	pectinesterase-2

Annotation

functional annotation

KEGG

GO BP

GO:0042545 [list] [network] cell wall modification

(72 genes)

IEA

GO CC

GO MF

GO:0046910 [list] [network] pectinesterase inhibitor activity	(57 genes)	IEA
GO:0030599 [list] [network] pectinesterase activity	(72 genes)	IEA

Protein

XP_025885716.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, plas 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_025885716.1)

Subcellular
localization
TargetP

other 8

(predict for XP_025885716.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101255775	sly-r.6 for 101255775	sly-u.5 for 101258375	sot-r.1 for 102606318	sot-r.1 for 102598997	nta-r.1 for 107815257	nta-r.1 for 107826812	nta-r.1 for 107808989	ath-u.5 for AT3G49220	ath-u.5 for PMEPCRF	gma-u.5 for 100808236	gma-u.5 for 100776752	gma-u.5 for 106796002	bra-r.6 for 103844813	bra-r.6 for 103875179	bra-r.6 for 103873080	vvi-u.5 for 100258861	ppo-u.5 for 7475195	ppo-u.5 for 7496396	mtr-u.5 for 11441469	mtr-u.5 for 11432815	ghi-r.1 for 107904569	ghi-r.1 for 107924268	ghi-r.1 for 107929581	bna-r.1 for 106357682	bna-r.1 for 106347430	bna-r.1 for 106452313	cit-r.1 for 102624576	osa-u.5 for 9270906	zma-u.5 for 100285544

Ortholog

Ortholog ID: 4093

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

Symbol

PMEPCRF

Function^*

pectin methylesterase