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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101256059   pentatricopeptide repeat-containing protein At2g27610 
 sly-r.6   101256059   pentatricopeptide repeat-containing protein At2g27610 
 sot-r.1   102602727   pentatricopeptide repeat-containing protein At2g27610 
 nta-r.1   107796089   pentatricopeptide repeat-containing protein At2g27610-like 
 nta-r.1   107759418   pentatricopeptide repeat-containing protein At2g27610-like 
 ath-u.5   AT2G27610   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100818767   pentatricopeptide repeat-containing protein At2g27610 
 bra-r.6   117133525   pentatricopeptide repeat-containing protein At2g27610-like 
 bra-r.6   103864848   pentatricopeptide repeat-containing protein At2g27610 
 ghi-r.1   107961685   pentatricopeptide repeat-containing protein At2g27610 
 ghi-r.1   107953277   pentatricopeptide repeat-containing protein At2g27610 
 cit-r.1   102616922   pentatricopeptide repeat-containing protein At2g27610 
 osa-u.5   4338983   pentatricopeptide repeat-containing protein At2g27610 
 tae-r.2   123146189   pentatricopeptide repeat-containing protein At2g27610 
 tae-r.2   123139889   pentatricopeptide repeat-containing protein At2g27610 
 tae-r.2   123129013   pentatricopeptide repeat-containing protein At2g27610 
 hvu-r.1   123404055   pentatricopeptide repeat-containing protein At2g27610 
 sbi-r.1   8072507   pentatricopeptide repeat-containing protein At2g27610 
 bdi-r.1   100846118   pentatricopeptide repeat-containing protein At2g27610 

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Top 50 coexpressed genes to 101256059 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101256059 (sly-u.5 coexpression data)

CoexMap"101256059"


slyLOC101256059 | Entrez gene ID : 101256059      
Species sly sot nta ath gma bra ghi cit osa tae hvu sbi bdi zma cre ppo mtr bna vvi
Paralog 2 1 2 1 1 2 2 1 1 3 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010313344.1 [sequence] [blastp]
XP_010313345.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  nucl 3,  chlo_mito 3,  cyto 2,  chlo 1  (predict for XP_010313344.1)
mito 3,  nucl 3,  chlo_mito 3,  cyto 2,  chlo 1  (predict for XP_010313345.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_010313344.1)
mito 3  (predict for XP_010313345.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101256059
sly-r.6
for
101256059
sot-r.1
for
102602727
nta-r.1
for
107796089
nta-r.1
for
107759418
ath-u.5
for
AT2G27610
gma-u.5
for
100818767
bra-r.6
for
117133525
bra-r.6
for
103864848
ghi-r.1
for
107961685
ghi-r.1
for
107953277
cit-r.1
for
102616922
osa-u.5
for
4338983
tae-r.2
for
123146189
tae-r.2
for
123139889
tae-r.2
for
123129013
hvu-r.1
for
123404055
sbi-r.1
for
8072507
bdi-r.1
for
100846118


Ortholog ID: 11250
Species sly sot nta nta ath gma bra bra ghi ghi cit osa tae tae tae hvu sbi bdi
Symbol LOC101256059 LOC102602727 LOC107796089 LOC107759418 AT2G27610 LOC100818767 LOC117133525 LOC103864848 LOC107961685 LOC107953277 LOC102616922 LOC4338983 LOC123146189 LOC123139889 LOC123129013 LOC123404055 LOC8072507 LOC100846118
Function* pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610-like pentatricopeptide repeat-containing protein At2g27610-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610-like pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101256059 102602727 107796089 107759418 817307 100818767 117133525 103864848 107961685 107953277 102616922 4338983 123146189 123139889 123129013 123404055 8072507 100846118
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